GSE213291 GSE213294 GSK-J4 0 v 3 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE213291_GSE213294_GSK-J4_0_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE213291_GSE213294_GSK-J4_0_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE213291_GSE213294_GSK-J4_0_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE213291_GSE213294_GSK-J4_0_v_3_human_up.

Results found

Linked to

	Label	Description
	RPS18 Gene (Entity type)	ribosomal protein S18
	VAMP7 Gene (Entity type)	vesicle associated membrane protein 7
	THAP9-AS1 Gene (Entity type)	THAP9 antisense RNA 1
	POU3F3 Gene (Entity type)	POU class 3 homeobox 3
	LINC00662 Gene (Entity type)	long intergenic non-protein coding RNA 662
	CRNDE Gene (Entity type)	colorectal neoplasia differentially expressed
	SBDSP1 Gene (Entity type)	SBDS pseudogene 1
	LINC00869 Gene (Entity type)	long intergenic non-protein coding RNA 869
	C2orf74-DT Gene (Entity type)	C2orf74 divergent transcript
	ZNF407-AS1 Gene (Entity type)	ZNF407 antisense RNA 1

RPS18

Gene (Entity type)

ribosomal protein S18

VAMP7

Gene (Entity type)

vesicle associated membrane protein 7

THAP9-AS1

Gene (Entity type)

THAP9 antisense RNA 1

POU3F3

Gene (Entity type)

POU class 3 homeobox 3

LINC00662

Gene (Entity type)

long intergenic non-protein coding RNA 662

CRNDE

Gene (Entity type)

colorectal neoplasia differentially expressed

SBDSP1

Gene (Entity type)

SBDS pseudogene 1

LINC00869

Gene (Entity type)

long intergenic non-protein coding RNA 869

C2orf74-DT

Gene (Entity type)

C2orf74 divergent transcript

ZNF407-AS1

Gene (Entity type)

ZNF407 antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.