HAT1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with HAT1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with HAT1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with HAT1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with HAT1 Up.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	IMPA1 Gene (Entity type)	ENSG00000133731 - inositol monophosphatase 1
	PPP1CC Gene (Entity type)	ENSG00000186298 - protein phosphatase 1 catalytic subunit gamma
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	TM6SF1 Gene (Entity type)	ENSG00000136404 - transmembrane 6 superfamily member 1
	TERT Gene (Entity type)	ENSG00000164362 - telomerase reverse transcriptase
	MSR1 Gene (Entity type)	ENSG00000038945 - macrophage scavenger receptor 1
	ALG13 Gene (Entity type)	ENSG00000101901 - ALG13 UDP-N-acetylglucosaminyltransferase subunit
	KLK13 Gene (Entity type)	ENSG00000167759 - kallikrein related peptidase 13

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

IMPA1

Gene (Entity type)

ENSG00000133731 - inositol monophosphatase 1

PPP1CC

Gene (Entity type)

ENSG00000186298 - protein phosphatase 1 catalytic subunit gamma

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

TM6SF1

Gene (Entity type)

ENSG00000136404 - transmembrane 6 superfamily member 1

TERT

Gene (Entity type)

ENSG00000164362 - telomerase reverse transcriptase

MSR1

Gene (Entity type)

ENSG00000038945 - macrophage scavenger receptor 1

ALG13

Gene (Entity type)

ENSG00000101901 - ALG13 UDP-N-acetylglucosaminyltransferase subunit

KLK13

Gene (Entity type)

ENSG00000167759 - kallikrein related peptidase 13

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.