SPINK5 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SPINK5 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SPINK5 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SPINK5 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SPINK5 Up.

Results found

Linked to

	Label	Description
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	TFAM Gene (Entity type)	ENSG00000108064 - transcription factor A, mitochondrial
	TRAPPC6A Gene (Entity type)	ENSG00000007255 - trafficking protein particle complex subunit 6A
	TM4SF20 Gene (Entity type)	ENSG00000168955 - transmembrane 4 L six family member 20
	PDCD6 Gene (Entity type)	ENSG00000249915 - programmed cell death 6
	VAMP2 Gene (Entity type)	ENSG00000220205 - vesicle associated membrane protein 2
	RAB33A Gene (Entity type)	ENSG00000134594 - RAB33A, member RAS oncogene family
	PTRH2 Gene (Entity type)	ENSG00000141378 - peptidyl-tRNA hydrolase 2
	MRPL35 Gene (Entity type)	ENSG00000132313 - mitochondrial ribosomal protein L35
	RGS19 Gene (Entity type)	ENSG00000171700 - regulator of G protein signaling 19

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

TFAM

Gene (Entity type)

ENSG00000108064 - transcription factor A, mitochondrial

TRAPPC6A

Gene (Entity type)

ENSG00000007255 - trafficking protein particle complex subunit 6A

TM4SF20

Gene (Entity type)

ENSG00000168955 - transmembrane 4 L six family member 20

PDCD6

Gene (Entity type)

ENSG00000249915 - programmed cell death 6

VAMP2

Gene (Entity type)

ENSG00000220205 - vesicle associated membrane protein 2

RAB33A

Gene (Entity type)

ENSG00000134594 - RAB33A, member RAS oncogene family

PTRH2

Gene (Entity type)

ENSG00000141378 - peptidyl-tRNA hydrolase 2

MRPL35

Gene (Entity type)

ENSG00000132313 - mitochondrial ribosomal protein L35

RGS19

Gene (Entity type)

ENSG00000171700 - regulator of G protein signaling 19

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.