GSE151820 GSE151823 RUNX2 knockdown T cell RNA Small Interfering 4 v 6 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE151820_GSE151823_RUNX2 knockdown_T cell_RNA Small Interfering_4_v_6_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE151820_GSE151823_RUNX2 knockdown_T cell_RNA Small Interfering_4_v_6_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE151820_GSE151823_RUNX2 knockdown_T cell_RNA Small Interfering_4_v_6_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE151820_GSE151823_RUNX2 knockdown_T cell_RNA Small Interfering_4_v_6_human_dn.

Results found

Linked to

	Label	Description
	LINC01128 Gene (Entity type)	ENSG00000228794 - long intergenic non-protein coding RNA 1128
	SLC71A3P Gene (Entity type)	ENSG00000290770 - solute carrier family 71 member 3, pseudogene
	LOC105374901 Gene (Entity type)	ENSG00000226281 - uncharacterized LOC105374901
	LOC107985688 Gene (Entity type)	ENSG00000228427 - uncharacterized LOC107985688
	LINC02321 Gene (Entity type)	ENSG00000258884 - long intergenic non-protein coding RNA 2321
	LOC124900697 Gene (Entity type)	ENSG00000289643 - uncharacterized LOC124900697
	SCAT2 Gene (Entity type)	ENSG00000257596 - S-phase cancer associated transcript 2
	RPSAP8 Gene (Entity type)	ENSG00000230592 - ribosomal protein SA pseudogene 8
	RCAN2-DT Gene (Entity type)	ENSG00000236466 - RCAN2 divergent transcript
	HHLA1 Gene (Entity type)	ENSG00000132297 - HHLA1 neighbor of OC90

LINC01128

Gene (Entity type)

ENSG00000228794 - long intergenic non-protein coding RNA 1128

SLC71A3P

Gene (Entity type)

ENSG00000290770 - solute carrier family 71 member 3, pseudogene

LOC105374901

Gene (Entity type)

ENSG00000226281 - uncharacterized LOC105374901

LOC107985688

Gene (Entity type)

ENSG00000228427 - uncharacterized LOC107985688

LINC02321

Gene (Entity type)

ENSG00000258884 - long intergenic non-protein coding RNA 2321

LOC124900697

Gene (Entity type)

ENSG00000289643 - uncharacterized LOC124900697

SCAT2

Gene (Entity type)

ENSG00000257596 - S-phase cancer associated transcript 2

RPSAP8

Gene (Entity type)

ENSG00000230592 - ribosomal protein SA pseudogene 8

RCAN2-DT

Gene (Entity type)

ENSG00000236466 - RCAN2 divergent transcript

HHLA1

Gene (Entity type)

ENSG00000132297 - HHLA1 neighbor of OC90

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.