EPX Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with EPX Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with EPX Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with EPX Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with EPX Up.

Results found

Linked to

	Label	Description
	AP5M1 Gene (Entity type)	ENSG00000053770 - adaptor related protein complex 5 subunit mu 1
	GRSF1 Gene (Entity type)	ENSG00000132463 - G-rich RNA sequence binding factor 1
	PPM1A Gene (Entity type)	ENSG00000100614 - protein phosphatase, Mg2+/Mn2+ dependent 1A
	ZFAND6 Gene (Entity type)	ENSG00000086666 - zinc finger AN1-type containing 6
	IFT25 Gene (Entity type)	ENSG00000081870 - intraflagellar transport 25
	USP12 Gene (Entity type)	ENSG00000152484 - ubiquitin specific peptidase 12
	KYAT3 Gene (Entity type)	ENSG00000137944 - kynurenine aminotransferase 3
	CDK8 Gene (Entity type)	ENSG00000132964 - cyclin dependent kinase 8
	EBI3 Gene (Entity type)	ENSG00000105246 - Epstein-Barr virus induced 3
	ORC4 Gene (Entity type)	ENSG00000115947 - origin recognition complex subunit 4

AP5M1

Gene (Entity type)

ENSG00000053770 - adaptor related protein complex 5 subunit mu 1

GRSF1

Gene (Entity type)

ENSG00000132463 - G-rich RNA sequence binding factor 1

PPM1A

Gene (Entity type)

ENSG00000100614 - protein phosphatase, Mg2+/Mn2+ dependent 1A

ZFAND6

Gene (Entity type)

ENSG00000086666 - zinc finger AN1-type containing 6

IFT25

Gene (Entity type)

ENSG00000081870 - intraflagellar transport 25

USP12

Gene (Entity type)

ENSG00000152484 - ubiquitin specific peptidase 12

KYAT3

Gene (Entity type)

ENSG00000137944 - kynurenine aminotransferase 3

CDK8

Gene (Entity type)

ENSG00000132964 - cyclin dependent kinase 8

EBI3

Gene (Entity type)

ENSG00000105246 - Epstein-Barr virus induced 3

ORC4

Gene (Entity type)

ENSG00000115947 - origin recognition complex subunit 4

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.