PAPOLA Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PAPOLA Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PAPOLA Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PAPOLA Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PAPOLA Up.

Results found

Linked to

	Label	Description
	IL16 Gene (Entity type)	ENSG00000172349 - interleukin 16
	RNF38 Gene (Entity type)	ENSG00000137075 - ring finger protein 38
	TM6SF1 Gene (Entity type)	ENSG00000136404 - transmembrane 6 superfamily member 1
	CHIT1 Gene (Entity type)	ENSG00000133063 - chitinase 1
	ATRX Gene (Entity type)	ENSG00000085224 - ATRX chromatin remodeler
	ZMYND11 Gene (Entity type)	ENSG00000015171 - zinc finger MYND-type containing 11
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	CCR5 Gene (Entity type)	ENSG00000160791 - C-C motif chemokine receptor 5
	LSM6 Gene (Entity type)	ENSG00000164167 - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
	MFF Gene (Entity type)	ENSG00000168958 - mitochondrial fission factor

IL16

Gene (Entity type)

ENSG00000172349 - interleukin 16

RNF38

Gene (Entity type)

ENSG00000137075 - ring finger protein 38

TM6SF1

Gene (Entity type)

ENSG00000136404 - transmembrane 6 superfamily member 1

CHIT1

Gene (Entity type)

ENSG00000133063 - chitinase 1

ATRX

Gene (Entity type)

ENSG00000085224 - ATRX chromatin remodeler

ZMYND11

Gene (Entity type)

ENSG00000015171 - zinc finger MYND-type containing 11

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

CCR5

Gene (Entity type)

ENSG00000160791 - C-C motif chemokine receptor 5

LSM6

Gene (Entity type)

ENSG00000164167 - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated

MFF

Gene (Entity type)

ENSG00000168958 - mitochondrial fission factor

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.