EDA2R Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with EDA2R Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with EDA2R Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with EDA2R Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with EDA2R Up.

Results found

Linked to

	Label	Description
	HCK Gene (Entity type)	ENSG00000101336 - HCK proto-oncogene, Src family tyrosine kinase
	VPS51 Gene (Entity type)	ENSG00000149823 - VPS51 subunit of GARP complex
	PLA2G12A Gene (Entity type)	ENSG00000123739 - phospholipase A2 group XIIA
	CSF3R Gene (Entity type)	ENSG00000119535 - colony stimulating factor 3 receptor
	AP2S1 Gene (Entity type)	ENSG00000042753 - adaptor related protein complex 2 subunit sigma 1
	SPOP Gene (Entity type)	ENSG00000121067 - speckle type BTB/POZ protein
	FAM149A Gene (Entity type)	ENSG00000109794 - family with sequence similarity 149 member A
	INTS1 Gene (Entity type)	ENSG00000164880 - integrator complex subunit 1
	PPP3R1 Gene (Entity type)	ENSG00000221823 - protein phosphatase 3 regulatory subunit B, alpha
	ZDHHC7 Gene (Entity type)	ENSG00000153786 - zDHHC palmitoyltransferase 7

HCK

Gene (Entity type)

ENSG00000101336 - HCK proto-oncogene, Src family tyrosine kinase

VPS51

Gene (Entity type)

ENSG00000149823 - VPS51 subunit of GARP complex

PLA2G12A

Gene (Entity type)

ENSG00000123739 - phospholipase A2 group XIIA

CSF3R

Gene (Entity type)

ENSG00000119535 - colony stimulating factor 3 receptor

AP2S1

Gene (Entity type)

ENSG00000042753 - adaptor related protein complex 2 subunit sigma 1

SPOP

Gene (Entity type)

ENSG00000121067 - speckle type BTB/POZ protein

FAM149A

Gene (Entity type)

ENSG00000109794 - family with sequence similarity 149 member A

INTS1

Gene (Entity type)

ENSG00000164880 - integrator complex subunit 1

PPP3R1

Gene (Entity type)

ENSG00000221823 - protein phosphatase 3 regulatory subunit B, alpha

ZDHHC7

Gene (Entity type)

ENSG00000153786 - zDHHC palmitoyltransferase 7

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.