GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 3 v 7 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_7_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_7_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_7_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_7_human_up.

Results found

Linked to

	Label	Description
	LINC00261 Gene (Entity type)	ENSG00000259974 - long intergenic non-protein coding RNA 261
	LMNTD2-AS1 Gene (Entity type)	ENSG00000254815 - LMNTD2 antisense RNA 1
	FAM225B Gene (Entity type)	ENSG00000225684 - family with sequence similarity 225 member B
	RPL18AP4 Gene (Entity type)	ENSG00000217644 - ribosomal protein L18a pseudogene 4
	KIAA0087 Gene (Entity type)	ENSG00000122548 - KIAA0087 lncRNA
	VN1R110P Gene (Entity type)	ENSG00000231725 - vomeronasal 1 receptor 110 pseudogene
	MTND4P26 Gene (Entity type)	ENSG00000234065 - MT-ND4 pseudogene 26
	SLC60A2P1 Gene (Entity type)	ENSG00000250827 - SLC60A2 pseudogene 1
	LOC101928446 Gene (Entity type)	ENSG00000260862 - uncharacterized LOC101928446
	LOC400622 Gene (Entity type)	ENSG00000267665 - uncharacterized LOC400622

LINC00261

Gene (Entity type)

ENSG00000259974 - long intergenic non-protein coding RNA 261

LMNTD2-AS1

Gene (Entity type)

ENSG00000254815 - LMNTD2 antisense RNA 1

FAM225B

Gene (Entity type)

ENSG00000225684 - family with sequence similarity 225 member B

RPL18AP4

Gene (Entity type)

ENSG00000217644 - ribosomal protein L18a pseudogene 4

KIAA0087

Gene (Entity type)

ENSG00000122548 - KIAA0087 lncRNA

VN1R110P

Gene (Entity type)

ENSG00000231725 - vomeronasal 1 receptor 110 pseudogene

MTND4P26

Gene (Entity type)

ENSG00000234065 - MT-ND4 pseudogene 26

SLC60A2P1

Gene (Entity type)

ENSG00000250827 - SLC60A2 pseudogene 1

LOC101928446

Gene (Entity type)

ENSG00000260862 - uncharacterized LOC101928446

LOC400622

Gene (Entity type)

ENSG00000267665 - uncharacterized LOC400622

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.