TRIM54 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TRIM54 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TRIM54 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TRIM54 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TRIM54 Up.

Results found

Linked to

	Label	Description
	SDHD Gene (Entity type)	ENSG00000204370 - succinate dehydrogenase complex subunit D
	ZNF32 Gene (Entity type)	ENSG00000169740 - zinc finger protein 32
	PPP2R5C Gene (Entity type)	ENSG00000078304 - protein phosphatase 2 regulatory subunit B'gamma
	EXOSC8 Gene (Entity type)	ENSG00000120699 - exosome component 8
	CCR5 Gene (Entity type)	ENSG00000160791 - C-C motif chemokine receptor 5
	YEATS4 Gene (Entity type)	ENSG00000127337 - YEATS domain containing 4
	SDHAF3 Gene (Entity type)	ENSG00000196636 - succinate dehydrogenase complex assembly factor 3
	ANKRD46 Gene (Entity type)	ENSG00000186106 - ankyrin repeat domain 46
	ELP5 Gene (Entity type)	ENSG00000170291 - elongator acetyltransferase complex subunit 5
	NARS2 Gene (Entity type)	ENSG00000137513 - asparaginyl-tRNA synthetase 2, mitochondrial

SDHD

Gene (Entity type)

ENSG00000204370 - succinate dehydrogenase complex subunit D

ZNF32

Gene (Entity type)

ENSG00000169740 - zinc finger protein 32

PPP2R5C

Gene (Entity type)

ENSG00000078304 - protein phosphatase 2 regulatory subunit B'gamma

EXOSC8

Gene (Entity type)

ENSG00000120699 - exosome component 8

CCR5

Gene (Entity type)

ENSG00000160791 - C-C motif chemokine receptor 5

YEATS4

Gene (Entity type)

ENSG00000127337 - YEATS domain containing 4

SDHAF3

Gene (Entity type)

ENSG00000196636 - succinate dehydrogenase complex assembly factor 3

ANKRD46

Gene (Entity type)

ENSG00000186106 - ankyrin repeat domain 46

ELP5

Gene (Entity type)

ENSG00000170291 - elongator acetyltransferase complex subunit 5

NARS2

Gene (Entity type)

ENSG00000137513 - asparaginyl-tRNA synthetase 2, mitochondrial

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.