GSE128255 NDP knockdown stem cell 3 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE128255_NDP knockdown_stem cell_3_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE128255_NDP knockdown_stem cell_3_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE128255_NDP knockdown_stem cell_3_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE128255_NDP knockdown_stem cell_3_v_0_human_dn.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	PFDN2 Gene (Entity type)	ENSG00000143256 - prefoldin subunit 2
	CAMK1 Gene (Entity type)	ENSG00000134072 - calcium/calmodulin dependent protein kinase I
	AKR1A1 Gene (Entity type)	ENSG00000117448 - aldo-keto reductase family 1 member A1
	PPIA Gene (Entity type)	ENSG00000196262 - peptidylprolyl isomerase A
	CDC123 Gene (Entity type)	ENSG00000151465 - cell division cycle 123
	NDUFB1 Gene (Entity type)	ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1
	PSMB2 Gene (Entity type)	ENSG00000126067 - proteasome 20S subunit beta 2
	POLR3K Gene (Entity type)	ENSG00000161980 - RNA polymerase III subunit K
	POLA2 Gene (Entity type)	ENSG00000014138 - DNA polymerase alpha 2, accessory subunit

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

PFDN2

Gene (Entity type)

ENSG00000143256 - prefoldin subunit 2

CAMK1

Gene (Entity type)

ENSG00000134072 - calcium/calmodulin dependent protein kinase I

AKR1A1

Gene (Entity type)

ENSG00000117448 - aldo-keto reductase family 1 member A1

PPIA

Gene (Entity type)

ENSG00000196262 - peptidylprolyl isomerase A

CDC123

Gene (Entity type)

ENSG00000151465 - cell division cycle 123

NDUFB1

Gene (Entity type)

ENSG00000183648 - NADH:ubiquinone oxidoreductase subunit B1

PSMB2

Gene (Entity type)

ENSG00000126067 - proteasome 20S subunit beta 2

POLR3K

Gene (Entity type)

ENSG00000161980 - RNA polymerase III subunit K

POLA2

Gene (Entity type)

ENSG00000014138 - DNA polymerase alpha 2, accessory subunit

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.