GSE113952 GSE113953 Chtop knockdown HEK293 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE113952_GSE113953_Chtop knockdown_HEK293_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE113952_GSE113953_Chtop knockdown_HEK293_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE113952_GSE113953_Chtop knockdown_HEK293_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE113952_GSE113953_Chtop knockdown_HEK293_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	H3-3A Gene (Entity type)	ENSG00000163041 - H3.3 histone A
	LINC00665 Gene (Entity type)	ENSG00000232677 - long intergenic non-protein coding RNA 665
	MRPL45 Gene (Entity type)	ENSG00000278845 - mitochondrial ribosomal protein L45
	LOC283683 Gene (Entity type)	ENSG00000274253 - uncharacterized LOC283683
	LINC00839 Gene (Entity type)	ENSG00000185904 - long intergenic non-protein coding RNA 839
	HCG18 Gene (Entity type)	ENSG00000231074 - HLA complex group 18
	MSANTD7 Gene (Entity type)	ENSG00000284024 - Myb/SANT DNA binding domain containing 7
	HOTAIR Gene (Entity type)	ENSG00000228630 - HOX transcript antisense RNA
	SVIL-AS1 Gene (Entity type)	ENSG00000291093 - SVIL antisense RNA 1
	AMZ2P1 Gene (Entity type)	ENSG00000291140 - AMZ2 pseudogene 1

H3-3A

Gene (Entity type)

ENSG00000163041 - H3.3 histone A

LINC00665

Gene (Entity type)

ENSG00000232677 - long intergenic non-protein coding RNA 665

MRPL45

Gene (Entity type)

ENSG00000278845 - mitochondrial ribosomal protein L45

LOC283683

Gene (Entity type)

ENSG00000274253 - uncharacterized LOC283683

LINC00839

Gene (Entity type)

ENSG00000185904 - long intergenic non-protein coding RNA 839

HCG18

Gene (Entity type)

ENSG00000231074 - HLA complex group 18

MSANTD7

Gene (Entity type)

ENSG00000284024 - Myb/SANT DNA binding domain containing 7

HOTAIR

Gene (Entity type)

ENSG00000228630 - HOX transcript antisense RNA

SVIL-AS1

Gene (Entity type)

ENSG00000291093 - SVIL antisense RNA 1

AMZ2P1

Gene (Entity type)

ENSG00000291140 - AMZ2 pseudogene 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.