PTPRM Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTPRM Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTPRM Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTPRM Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTPRM Down.

Results found

Linked to

	Label	Description
	PRPS1 Gene (Entity type)	ENSG00000147224 - phosphoribosyl pyrophosphate synthetase 1
	HPGDS Gene (Entity type)	ENSG00000163106 - hematopoietic prostaglandin D synthase
	MED24 Gene (Entity type)	ENSG00000008838 - mediator complex subunit 24
	SAE1 Gene (Entity type)	ENSG00000142230 - SUMO1 activating enzyme subunit 1
	SDHAF3 Gene (Entity type)	ENSG00000196636 - succinate dehydrogenase complex assembly factor 3
	RPL29 Gene (Entity type)	ENSG00000162244 - ribosomal protein L29
	ATF7IP Gene (Entity type)	ENSG00000171681 - activating transcription factor 7 interacting protein
	CALHM2 Gene (Entity type)	ENSG00000138172 - calcium homeostasis modulator family member 2
	CASC3 Gene (Entity type)	ENSG00000108349 - CASC3 exon junction complex subunit
	ADCY2 Gene (Entity type)	ENSG00000078295 - adenylate cyclase 2

PRPS1

Gene (Entity type)

ENSG00000147224 - phosphoribosyl pyrophosphate synthetase 1

HPGDS

Gene (Entity type)

ENSG00000163106 - hematopoietic prostaglandin D synthase

MED24

Gene (Entity type)

ENSG00000008838 - mediator complex subunit 24

SAE1

Gene (Entity type)

ENSG00000142230 - SUMO1 activating enzyme subunit 1

SDHAF3

Gene (Entity type)

ENSG00000196636 - succinate dehydrogenase complex assembly factor 3

RPL29

Gene (Entity type)

ENSG00000162244 - ribosomal protein L29

ATF7IP

Gene (Entity type)

ENSG00000171681 - activating transcription factor 7 interacting protein

CALHM2

Gene (Entity type)

ENSG00000138172 - calcium homeostasis modulator family member 2

CASC3

Gene (Entity type)

ENSG00000108349 - CASC3 exon junction complex subunit

ADCY2

Gene (Entity type)

ENSG00000078295 - adenylate cyclase 2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.