PMEPA1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PMEPA1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PMEPA1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PMEPA1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PMEPA1 Up.

Results found

Linked to

	Label	Description
	SDHD Gene (Entity type)	ENSG00000204370 - succinate dehydrogenase complex subunit D
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	SIVA1 Gene (Entity type)	ENSG00000184990 - SIVA1 apoptosis inducing factor
	PDSS1 Gene (Entity type)	ENSG00000148459 - decaprenyl diphosphate synthase subunit 1
	LSM1 Gene (Entity type)	ENSG00000175324 - LSM1 homolog, mRNA degradation associated
	SPDEF Gene (Entity type)	ENSG00000124664 - SAM pointed domain containing ETS transcription factor
	IGSF6 Gene (Entity type)	ENSG00000140749 - immunoglobulin superfamily member 6
	HS3ST2 Gene (Entity type)	ENSG00000122254 - heparan sulfate-glucosamine 3-sulfotransferase 2
	PEX3 Gene (Entity type)	ENSG00000034693 - peroxisomal biogenesis factor 3
	NUDT1 Gene (Entity type)	ENSG00000106268 - nudix hydrolase 1

SDHD

Gene (Entity type)

ENSG00000204370 - succinate dehydrogenase complex subunit D

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

SIVA1

Gene (Entity type)

ENSG00000184990 - SIVA1 apoptosis inducing factor

PDSS1

Gene (Entity type)

ENSG00000148459 - decaprenyl diphosphate synthase subunit 1

LSM1

Gene (Entity type)

ENSG00000175324 - LSM1 homolog, mRNA degradation associated

SPDEF

Gene (Entity type)

ENSG00000124664 - SAM pointed domain containing ETS transcription factor

IGSF6

Gene (Entity type)

ENSG00000140749 - immunoglobulin superfamily member 6

HS3ST2

Gene (Entity type)

ENSG00000122254 - heparan sulfate-glucosamine 3-sulfotransferase 2

PEX3

Gene (Entity type)

ENSG00000034693 - peroxisomal biogenesis factor 3

NUDT1

Gene (Entity type)

ENSG00000106268 - nudix hydrolase 1

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.