GSE122979 GSE122980 LCL-161 MCF-7 2 v 3 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE122979_GSE122980_LCL-161_MCF-7_2_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE122979_GSE122980_LCL-161_MCF-7_2_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE122979_GSE122980_LCL-161_MCF-7_2_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE122979_GSE122980_LCL-161_MCF-7_2_v_3_human_up.

Results found

Linked to

	Label	Description
	TRIM16L Gene (Entity type)	tripartite motif containing 16 like (pseudogene)
	DUBR Gene (Entity type)	DPPA2 upstream binding RNA
	KRTAP5-AS1 Gene (Entity type)	KRTAP5-1/KRTAP5-2 antisense RNA 1
	ICAM4-AS1 Gene (Entity type)	ICAM4 antisense RNA 1
	LOC105375523 Gene (Entity type)	uncharacterized LOC105375523
	KLHDC7B-DT Gene (Entity type)	KLHDC7B divergent transcript
	KTN1-AS1 Gene (Entity type)	KTN1 antisense RNA 1
	BMPR1AP1 Gene (Entity type)	bone morphogenetic protein receptor type 1A pseudogene 1
	RPL17P28 Gene (Entity type)	ribosomal protein L17 pseudogene 28
	LRRC37A17P Gene (Entity type)	leucine rich repeat containing 37 member A17, pseudogene

TRIM16L

Gene (Entity type)

tripartite motif containing 16 like (pseudogene)

DUBR

Gene (Entity type)

DPPA2 upstream binding RNA

KRTAP5-AS1

Gene (Entity type)

KRTAP5-1/KRTAP5-2 antisense RNA 1

ICAM4-AS1

Gene (Entity type)

ICAM4 antisense RNA 1

LOC105375523

Gene (Entity type)

uncharacterized LOC105375523

KLHDC7B-DT

Gene (Entity type)

KLHDC7B divergent transcript

KTN1-AS1

Gene (Entity type)

KTN1 antisense RNA 1

BMPR1AP1

Gene (Entity type)

bone morphogenetic protein receptor type 1A pseudogene 1

RPL17P28

Gene (Entity type)

ribosomal protein L17 pseudogene 28

LRRC37A17P

Gene (Entity type)

leucine rich repeat containing 37 member A17, pseudogene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.