CA9 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CA9 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CA9 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CA9 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CA9 Down.

Results found

Linked to

	Label	Description
	PPP2R2B Gene (Entity type)	ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	ESF1 Gene (Entity type)	ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein
	ZNF195 Gene (Entity type)	ENSG00000005801 - zinc finger protein 195
	SLC6A3 Gene (Entity type)	ENSG00000142319 - solute carrier family 6 member 3

PPP2R2B

Gene (Entity type)

ENSG00000156475 - protein phosphatase 2 regulatory subunit Bbeta

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

ESF1

Gene (Entity type)

ENSG00000089048 - ESF1 nucleolar pre-rRNA processing protein

ZNF195

Gene (Entity type)

ENSG00000005801 - zinc finger protein 195

SLC6A3

Gene (Entity type)

ENSG00000142319 - solute carrier family 6 member 3

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.