GSE207410 GSE207411 ARID1A knockdown 2 v 6 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE207410_GSE207411_ARID1A knockdown_2_v_6_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE207410_GSE207411_ARID1A knockdown_2_v_6_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE207410_GSE207411_ARID1A knockdown_2_v_6_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE207410_GSE207411_ARID1A knockdown_2_v_6_human_dn.

Results found

Linked to

	Label	Description
	H2AC11 Gene (Entity type)	ENSG00000196787 - H2A clustered histone 11
	PRR34-AS1 Gene (Entity type)	ENSG00000197182 - PRR34 antisense RNA 1
	LINC01133 Gene (Entity type)	ENSG00000224259 - long intergenic non-protein coding RNA 1133
	ZNF496-DT Gene (Entity type)	ENSG00000289234 - ZNF496 divergent transcript
	FAM86DP Gene (Entity type)	ENSG00000291223 - family with sequence similarity 86 member D, pseudogene
	TNS2-AS1 Gene (Entity type)	ENSG00000257337 - TNS2 antisense RNA 1
	AGAP2-AS1 Gene (Entity type)	ENSG00000255737 - AGAP2 antisense RNA 1
	PMS2P1 Gene (Entity type)	ENSG00000291178 - PMS1 homolog 2, mismatch repair system component pseudogene 1
	H4C4 Gene (Entity type)	ENSG00000277157 - H4 clustered histone 4
	MAFA-AS1 Gene (Entity type)	ENSG00000254338 - MAFA antisense RNA 1

H2AC11

Gene (Entity type)

ENSG00000196787 - H2A clustered histone 11

PRR34-AS1

Gene (Entity type)

ENSG00000197182 - PRR34 antisense RNA 1

LINC01133

Gene (Entity type)

ENSG00000224259 - long intergenic non-protein coding RNA 1133

ZNF496-DT

Gene (Entity type)

ENSG00000289234 - ZNF496 divergent transcript

FAM86DP

Gene (Entity type)

ENSG00000291223 - family with sequence similarity 86 member D, pseudogene

TNS2-AS1

Gene (Entity type)

ENSG00000257337 - TNS2 antisense RNA 1

AGAP2-AS1

Gene (Entity type)

ENSG00000255737 - AGAP2 antisense RNA 1

PMS2P1

Gene (Entity type)

ENSG00000291178 - PMS1 homolog 2, mismatch repair system component pseudogene 1

H4C4

Gene (Entity type)

ENSG00000277157 - H4 clustered histone 4

MAFA-AS1

Gene (Entity type)

ENSG00000254338 - MAFA antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.