BIK Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with BIK Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with BIK Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with BIK Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with BIK Up.

Results found

Linked to

	Label	Description
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	ACOX1 Gene (Entity type)	ENSG00000161533 - acyl-CoA oxidase 1
	TMEM140 Gene (Entity type)	ENSG00000146859 - transmembrane protein 140
	MARF1 Gene (Entity type)	ENSG00000166783 - meiosis regulator and mRNA stability factor 1
	CHST7 Gene (Entity type)	ENSG00000147119 - carbohydrate sulfotransferase 7
	PITPNB Gene (Entity type)	ENSG00000180957 - phosphatidylinositol transfer protein beta
	GLUD2 Gene (Entity type)	ENSG00000182890 - glutamate dehydrogenase 2
	ZNF750 Gene (Entity type)	ENSG00000141579 - zinc finger protein 750
	DRG1 Gene (Entity type)	ENSG00000185721 - developmentally regulated GTP binding protein 1
	EPB42 Gene (Entity type)	ENSG00000166947 - erythrocyte membrane protein band 4.2

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

ACOX1

Gene (Entity type)

ENSG00000161533 - acyl-CoA oxidase 1

TMEM140

Gene (Entity type)

ENSG00000146859 - transmembrane protein 140

MARF1

Gene (Entity type)

ENSG00000166783 - meiosis regulator and mRNA stability factor 1

CHST7

Gene (Entity type)

ENSG00000147119 - carbohydrate sulfotransferase 7

PITPNB

Gene (Entity type)

ENSG00000180957 - phosphatidylinositol transfer protein beta

GLUD2

Gene (Entity type)

ENSG00000182890 - glutamate dehydrogenase 2

ZNF750

Gene (Entity type)

ENSG00000141579 - zinc finger protein 750

DRG1

Gene (Entity type)

ENSG00000185721 - developmentally regulated GTP binding protein 1

EPB42

Gene (Entity type)

ENSG00000166947 - erythrocyte membrane protein band 4.2

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.