GUK1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GUK1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GUK1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GUK1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GUK1 Up.

Results found

Linked to

	Label	Description
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	STK25 Gene (Entity type)	ENSG00000115694 - serine/threonine kinase 25
	TULP4 Gene (Entity type)	ENSG00000130338 - TUB like protein 4
	LRRC1 Gene (Entity type)	ENSG00000137269 - leucine rich repeat containing 1
	TOMM40 Gene (Entity type)	ENSG00000130204 - translocase of outer mitochondrial membrane 40
	PDCD6 Gene (Entity type)	ENSG00000249915 - programmed cell death 6
	NECTIN2 Gene (Entity type)	ENSG00000130202 - nectin cell adhesion molecule 2
	MRPS12 Gene (Entity type)	ENSG00000128626 - mitochondrial ribosomal protein S12
	ZBED5 Gene (Entity type)	ENSG00000236287 - zinc finger BED-type containing 5
	PGLS Gene (Entity type)	ENSG00000130313 - 6-phosphogluconolactonase

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

STK25

Gene (Entity type)

ENSG00000115694 - serine/threonine kinase 25

TULP4

Gene (Entity type)

ENSG00000130338 - TUB like protein 4

LRRC1

Gene (Entity type)

ENSG00000137269 - leucine rich repeat containing 1

TOMM40

Gene (Entity type)

ENSG00000130204 - translocase of outer mitochondrial membrane 40

PDCD6

Gene (Entity type)

ENSG00000249915 - programmed cell death 6

NECTIN2

Gene (Entity type)

ENSG00000130202 - nectin cell adhesion molecule 2

MRPS12

Gene (Entity type)

ENSG00000128626 - mitochondrial ribosomal protein S12

ZBED5

Gene (Entity type)

ENSG00000236287 - zinc finger BED-type containing 5

PGLS

Gene (Entity type)

ENSG00000130313 - 6-phosphogluconolactonase

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.