GSE143790 BCL9 knockdown 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE143790_BCL9 knockdown_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE143790_BCL9 knockdown_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE143790_BCL9 knockdown_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE143790_BCL9 knockdown_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	MIR4435-2HG Gene (Entity type)	MIR4435-2 host gene
	SRCIN1 Gene (Entity type)	SRC kinase signaling inhibitor 1
	GFOD3P Gene (Entity type)	Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene
	BCYRN1 Gene (Entity type)	brain cytoplasmic RNA 1
	FMC1-LUC7L2 Gene (Entity type)	FMC1-LUC7L2 readthrough
	LINC00294 Gene (Entity type)	long intergenic non-protein coding RNA 294
	FAM225A Gene (Entity type)	family with sequence similarity 225 member A
	MIR3667HG Gene (Entity type)	MIR3667 host gene
	TMX2-CTNND1 Gene (Entity type)	TMX2-CTNND1 readthrough (NMD candidate)
	LINC02188 Gene (Entity type)	long intergenic non-protein coding RNA 2188

MIR4435-2HG

Gene (Entity type)

MIR4435-2 host gene

SRCIN1

Gene (Entity type)

SRC kinase signaling inhibitor 1

GFOD3P

Gene (Entity type)

Gfo/Idh/MocA-like oxidoreductase domain containing 3, pseudogene

BCYRN1

Gene (Entity type)

brain cytoplasmic RNA 1

FMC1-LUC7L2

Gene (Entity type)

FMC1-LUC7L2 readthrough

LINC00294

Gene (Entity type)

long intergenic non-protein coding RNA 294

FAM225A

Gene (Entity type)

family with sequence similarity 225 member A

MIR3667HG

Gene (Entity type)

MIR3667 host gene

TMX2-CTNND1

Gene (Entity type)

TMX2-CTNND1 readthrough (NMD candidate)

LINC02188

Gene (Entity type)

long intergenic non-protein coding RNA 2188

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.