SPIB Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with SPIB Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with SPIB Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with SPIB Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with SPIB Up.

Results found

Linked to

	Label	Description
	SDHD Gene (Entity type)	ENSG00000204370 - succinate dehydrogenase complex subunit D
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	PSMA1 Gene (Entity type)	ENSG00000129084 - proteasome 20S subunit alpha 1
	CCR5 Gene (Entity type)	ENSG00000160791 - C-C motif chemokine receptor 5
	MRPL40 Gene (Entity type)	ENSG00000185608 - mitochondrial ribosomal protein L40
	SDHAF3 Gene (Entity type)	ENSG00000196636 - succinate dehydrogenase complex assembly factor 3
	PSMA3 Gene (Entity type)	ENSG00000100567 - proteasome 20S subunit alpha 3
	SRP9 Gene (Entity type)	ENSG00000143742 - signal recognition particle 9
	NDUFV2 Gene (Entity type)	ENSG00000178127 - NADH:ubiquinone oxidoreductase core subunit V2
	SELENOF Gene (Entity type)	ENSG00000183291 - selenoprotein F

SDHD

Gene (Entity type)

ENSG00000204370 - succinate dehydrogenase complex subunit D

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

PSMA1

Gene (Entity type)

ENSG00000129084 - proteasome 20S subunit alpha 1

CCR5

Gene (Entity type)

ENSG00000160791 - C-C motif chemokine receptor 5

MRPL40

Gene (Entity type)

ENSG00000185608 - mitochondrial ribosomal protein L40

SDHAF3

Gene (Entity type)

ENSG00000196636 - succinate dehydrogenase complex assembly factor 3

PSMA3

Gene (Entity type)

ENSG00000100567 - proteasome 20S subunit alpha 3

SRP9

Gene (Entity type)

ENSG00000143742 - signal recognition particle 9

NDUFV2

Gene (Entity type)

ENSG00000178127 - NADH:ubiquinone oxidoreductase core subunit V2

SELENOF

Gene (Entity type)

ENSG00000183291 - selenoprotein F

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.