TIMP3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with TIMP3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with TIMP3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with TIMP3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with TIMP3 Up.

Results found

Linked to

	Label	Description
	HDAC2 Gene (Entity type)	ENSG00000196591 - histone deacetylase 2
	HINT1 Gene (Entity type)	ENSG00000169567 - histidine triad nucleotide binding protein 1
	NDUFB6 Gene (Entity type)	ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6
	MED28 Gene (Entity type)	ENSG00000118579 - mediator complex subunit 28
	SPCS3 Gene (Entity type)	ENSG00000129128 - signal peptidase complex subunit 3
	CCR5 Gene (Entity type)	ENSG00000160791 - C-C motif chemokine receptor 5
	PPP1CB Gene (Entity type)	ENSG00000213639 - protein phosphatase 1 catalytic subunit beta
	SIVA1 Gene (Entity type)	ENSG00000184990 - SIVA1 apoptosis inducing factor
	SRP9 Gene (Entity type)	ENSG00000143742 - signal recognition particle 9
	NSL1 Gene (Entity type)	ENSG00000117697 - NSL1 component of MIS12 kinetochore complex

HDAC2

Gene (Entity type)

ENSG00000196591 - histone deacetylase 2

HINT1

Gene (Entity type)

ENSG00000169567 - histidine triad nucleotide binding protein 1

NDUFB6

Gene (Entity type)

ENSG00000165264 - NADH:ubiquinone oxidoreductase subunit B6

MED28

Gene (Entity type)

ENSG00000118579 - mediator complex subunit 28

SPCS3

Gene (Entity type)

ENSG00000129128 - signal peptidase complex subunit 3

CCR5

Gene (Entity type)

ENSG00000160791 - C-C motif chemokine receptor 5

PPP1CB

Gene (Entity type)

ENSG00000213639 - protein phosphatase 1 catalytic subunit beta

SIVA1

Gene (Entity type)

ENSG00000184990 - SIVA1 apoptosis inducing factor

SRP9

Gene (Entity type)

ENSG00000143742 - signal recognition particle 9

NSL1

Gene (Entity type)

ENSG00000117697 - NSL1 component of MIS12 kinetochore complex

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.