GSE130482 TGM2 knockdown SW480 HCT 116 2 v 4 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE130482_TGM2 knockdown_SW480_HCT 116_2_v_4_human_up.

Results found

Linked to

	Label	Description
	PPP2R2C Gene (Entity type)	ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma
	BLVRA Gene (Entity type)	ENSG00000106605 - biliverdin reductase A
	ACADM Gene (Entity type)	ENSG00000117054 - acyl-CoA dehydrogenase medium chain
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	ASPA Gene (Entity type)	ENSG00000108381 - aspartoacylase
	OGFOD1 Gene (Entity type)	ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1
	TRIM9 Gene (Entity type)	ENSG00000100505 - tripartite motif containing 9
	ATP6V1E1 Gene (Entity type)	ENSG00000131100 - ATPase H+ transporting V1 subunit E1
	UTP18 Gene (Entity type)	ENSG00000011260 - UTP18 small subunit processome component
	PRICKLE1 Gene (Entity type)	ENSG00000139174 - prickle planar cell polarity protein 1

PPP2R2C

Gene (Entity type)

ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma

BLVRA

Gene (Entity type)

ENSG00000106605 - biliverdin reductase A

ACADM

Gene (Entity type)

ENSG00000117054 - acyl-CoA dehydrogenase medium chain

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

ASPA

Gene (Entity type)

ENSG00000108381 - aspartoacylase

OGFOD1

Gene (Entity type)

ENSG00000087263 - 2-oxoglutarate and iron dependent oxygenase domain containing 1

TRIM9

Gene (Entity type)

ENSG00000100505 - tripartite motif containing 9

ATP6V1E1

Gene (Entity type)

ENSG00000131100 - ATPase H+ transporting V1 subunit E1

UTP18

Gene (Entity type)

ENSG00000011260 - UTP18 small subunit processome component

PRICKLE1

Gene (Entity type)

ENSG00000139174 - prickle planar cell polarity protein 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.