PTX3 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PTX3 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PTX3 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PTX3 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PTX3 Up.

Results found

Linked to

	Label	Description
	CMTR1 Gene (Entity type)	ENSG00000137200 - cap methyltransferase 1
	ROCK1 Gene (Entity type)	ENSG00000067900 - Rho associated coiled-coil containing protein kinase 1
	CYP39A1 Gene (Entity type)	ENSG00000146233 - cytochrome P450 family 39 subfamily A member 1
	MAPKBP1 Gene (Entity type)	ENSG00000137802 - mitogen-activated protein kinase binding protein 1
	WNT4 Gene (Entity type)	ENSG00000162552 - Wnt family member 4
	MMRN1 Gene (Entity type)	ENSG00000138722 - multimerin 1
	SKI Gene (Entity type)	ENSG00000157933 - SKI proto-oncogene
	SLITRK5 Gene (Entity type)	ENSG00000165300 - SLIT and NTRK like family member 5
	FUT9 Gene (Entity type)	ENSG00000172461 - fucosyltransferase 9
	DAPK3 Gene (Entity type)	ENSG00000167657 - death associated protein kinase 3

CMTR1

Gene (Entity type)

ENSG00000137200 - cap methyltransferase 1

ROCK1

Gene (Entity type)

ENSG00000067900 - Rho associated coiled-coil containing protein kinase 1

CYP39A1

Gene (Entity type)

ENSG00000146233 - cytochrome P450 family 39 subfamily A member 1

MAPKBP1

Gene (Entity type)

ENSG00000137802 - mitogen-activated protein kinase binding protein 1

WNT4

Gene (Entity type)

ENSG00000162552 - Wnt family member 4

MMRN1

Gene (Entity type)

ENSG00000138722 - multimerin 1

SKI

Gene (Entity type)

ENSG00000157933 - SKI proto-oncogene

SLITRK5

Gene (Entity type)

ENSG00000165300 - SLIT and NTRK like family member 5

FUT9

Gene (Entity type)

ENSG00000172461 - fucosyltransferase 9

DAPK3

Gene (Entity type)

ENSG00000167657 - death associated protein kinase 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.