CA1 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CA1 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CA1 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CA1 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CA1 Up.

Results found

Linked to

	Label	Description
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	CMPK1 Gene (Entity type)	ENSG00000162368 - cytidine/uridine monophosphate kinase 1
	FBXW2 Gene (Entity type)	ENSG00000119402 - F-box and WD repeat domain containing 2
	DCAF10 Gene (Entity type)	ENSG00000122741 - DDB1 and CUL4 associated factor 10
	YEATS4 Gene (Entity type)	ENSG00000127337 - YEATS domain containing 4
	BRD3 Gene (Entity type)	ENSG00000169925 - bromodomain containing 3
	UBXN7 Gene (Entity type)	ENSG00000163960 - UBX domain protein 7
	PATZ1 Gene (Entity type)	ENSG00000100105 - POZ/BTB and AT hook containing zinc finger 1
	SRRM1 Gene (Entity type)	ENSG00000133226 - serine and arginine repetitive matrix 1
	FBXO3 Gene (Entity type)	ENSG00000110429 - F-box protein 3

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

CMPK1

Gene (Entity type)

ENSG00000162368 - cytidine/uridine monophosphate kinase 1

FBXW2

Gene (Entity type)

ENSG00000119402 - F-box and WD repeat domain containing 2

DCAF10

Gene (Entity type)

ENSG00000122741 - DDB1 and CUL4 associated factor 10

YEATS4

Gene (Entity type)

ENSG00000127337 - YEATS domain containing 4

BRD3

Gene (Entity type)

ENSG00000169925 - bromodomain containing 3

UBXN7

Gene (Entity type)

ENSG00000163960 - UBX domain protein 7

PATZ1

Gene (Entity type)

ENSG00000100105 - POZ/BTB and AT hook containing zinc finger 1

SRRM1

Gene (Entity type)

ENSG00000133226 - serine and arginine repetitive matrix 1

FBXO3

Gene (Entity type)

ENSG00000110429 - F-box protein 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.