PNLIP Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PNLIP Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PNLIP Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PNLIP Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PNLIP Up.

Results found

Linked to

	Label	Description
	NAXD Gene (Entity type)	ENSG00000213995 - NAD(P)HX dehydratase
	SRP54 Gene (Entity type)	ENSG00000100883 - signal recognition particle 54
	CENPM Gene (Entity type)	ENSG00000100162 - centromere protein M
	POLR2F Gene (Entity type)	ENSG00000100142 - RNA polymerase II, I and III subunit F
	GTF2A2 Gene (Entity type)	ENSG00000140307 - general transcription factor IIA subunit 2
	STRN3 Gene (Entity type)	ENSG00000196792 - striatin 3
	MIOS Gene (Entity type)	ENSG00000164654 - meiosis regulator for oocyte development
	PNOC Gene (Entity type)	ENSG00000168081 - prepronociceptin
	PAIP1 Gene (Entity type)	ENSG00000172239 - poly(A) binding protein interacting protein 1
	MED28 Gene (Entity type)	ENSG00000118579 - mediator complex subunit 28

NAXD

Gene (Entity type)

ENSG00000213995 - NAD(P)HX dehydratase

SRP54

Gene (Entity type)

ENSG00000100883 - signal recognition particle 54

CENPM

Gene (Entity type)

ENSG00000100162 - centromere protein M

POLR2F

Gene (Entity type)

ENSG00000100142 - RNA polymerase II, I and III subunit F

GTF2A2

Gene (Entity type)

ENSG00000140307 - general transcription factor IIA subunit 2

STRN3

Gene (Entity type)

ENSG00000196792 - striatin 3

MIOS

Gene (Entity type)

ENSG00000164654 - meiosis regulator for oocyte development

PNOC

Gene (Entity type)

ENSG00000168081 - prepronociceptin

PAIP1

Gene (Entity type)

ENSG00000172239 - poly(A) binding protein interacting protein 1

MED28

Gene (Entity type)

ENSG00000118579 - mediator complex subunit 28

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.