GSE139685 MI-2 1 v 3 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139685_MI-2_1_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139685_MI-2_1_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139685_MI-2_1_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139685_MI-2_1_v_3_human_dn.

Results found

Linked to

	Label	Description
	VARS1 Gene (Entity type)	valyl-tRNA synthetase 1
	MIR4435-2HG Gene (Entity type)	MIR4435-2 host gene
	MSL3B Gene (Entity type)	MSL complex subunit 3B
	DLEU1 Gene (Entity type)	deleted in lymphocytic leukemia 1
	LINC01106 Gene (Entity type)	long intergenic non-protein coding RNA 1106
	CHD9NB Gene (Entity type)	CHD9 neighbor
	HK2-DT Gene (Entity type)	HK2 divergent transcript
	IGFBP-AS1 Gene (Entity type)	IGFBP5 antisense RNA 1
	GCSHP5 Gene (Entity type)	GCSH pseudogene 5
	DIRC3 Gene (Entity type)	disrupted in renal carcinoma 3

VARS1

Gene (Entity type)

valyl-tRNA synthetase 1

MIR4435-2HG

Gene (Entity type)

MIR4435-2 host gene

MSL3B

Gene (Entity type)

MSL complex subunit 3B

DLEU1

Gene (Entity type)

deleted in lymphocytic leukemia 1

LINC01106

Gene (Entity type)

long intergenic non-protein coding RNA 1106

CHD9NB

Gene (Entity type)

CHD9 neighbor

HK2-DT

Gene (Entity type)

HK2 divergent transcript

IGFBP-AS1

Gene (Entity type)

IGFBP5 antisense RNA 1

GCSHP5

Gene (Entity type)

GCSH pseudogene 5

DIRC3

Gene (Entity type)

disrupted in renal carcinoma 3

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.