MARK4 Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with MARK4 Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with MARK4 Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with MARK4 Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MARK4 Up.

Results found

Linked to

	Label	Description
	VAMP7 Gene (Entity type)	ENSG00000292366 - vesicle associated membrane protein 7
	TNFAIP1 Gene (Entity type)	ENSG00000109079 - TNF alpha induced protein 1
	CRTC3 Gene (Entity type)	ENSG00000140577 - CREB regulated transcription coactivator 3
	ARGLU1 Gene (Entity type)	ENSG00000134884 - arginine and glutamate rich 1
	IMPA1 Gene (Entity type)	ENSG00000133731 - inositol monophosphatase 1
	AFG2B Gene (Entity type)	ENSG00000171763 - AAA ATPase AFG2B
	AKAP11 Gene (Entity type)	ENSG00000023516 - A-kinase anchoring protein 11
	FUT9 Gene (Entity type)	ENSG00000172461 - fucosyltransferase 9
	P2RY13 Gene (Entity type)	ENSG00000181631 - purinergic receptor P2Y13
	PPP2CB Gene (Entity type)	ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

VAMP7

Gene (Entity type)

ENSG00000292366 - vesicle associated membrane protein 7

TNFAIP1

Gene (Entity type)

ENSG00000109079 - TNF alpha induced protein 1

CRTC3

Gene (Entity type)

ENSG00000140577 - CREB regulated transcription coactivator 3

ARGLU1

Gene (Entity type)

ENSG00000134884 - arginine and glutamate rich 1

IMPA1

Gene (Entity type)

ENSG00000133731 - inositol monophosphatase 1

AFG2B

Gene (Entity type)

ENSG00000171763 - AAA ATPase AFG2B

AKAP11

Gene (Entity type)

ENSG00000023516 - A-kinase anchoring protein 11

FUT9

Gene (Entity type)

ENSG00000172461 - fucosyltransferase 9

P2RY13

Gene (Entity type)

ENSG00000181631 - purinergic receptor P2Y13

PPP2CB

Gene (Entity type)

ENSG00000104695 - protein phosphatase 2 catalytic subunit beta

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.