GSE228357 OGA knockdown 3 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE228357_OGA knockdown_3_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE228357_OGA knockdown_3_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE228357_OGA knockdown_3_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE228357_OGA knockdown_3_v_0_human_dn.

Results found

Linked to

	Label	Description
	FAM106A Gene (Entity type)	family with sequence similarity 106 member A
	SNHG1 Gene (Entity type)	small nucleolar RNA host gene 1
	SNHG29 Gene (Entity type)	small nucleolar RNA host gene 29
	PAX8-AS1 Gene (Entity type)	PAX8 antisense RNA 1
	MTCO2P12 Gene (Entity type)	MT-CO2 pseudogene 12
	MTATP6P1 Gene (Entity type)	MT-ATP6 pseudogene 1
	GTF3C2-AS2 Gene (Entity type)	GTF3C2 antisense RNA 2
	RPL13P5 Gene (Entity type)	ribosomal protein L13 pseudogene 5
	DSTNP2 Gene (Entity type)	DSTN pseudogene 2
	MIR3147HG Gene (Entity type)	MIR3147 host gene

FAM106A

Gene (Entity type)

family with sequence similarity 106 member A

SNHG1

Gene (Entity type)

small nucleolar RNA host gene 1

SNHG29

Gene (Entity type)

small nucleolar RNA host gene 29

PAX8-AS1

Gene (Entity type)

PAX8 antisense RNA 1

MTCO2P12

Gene (Entity type)

MT-CO2 pseudogene 12

MTATP6P1

Gene (Entity type)

MT-ATP6 pseudogene 1

GTF3C2-AS2

Gene (Entity type)

GTF3C2 antisense RNA 2

RPL13P5

Gene (Entity type)

ribosomal protein L13 pseudogene 5

DSTNP2

Gene (Entity type)

DSTN pseudogene 2

MIR3147HG

Gene (Entity type)

MIR3147 host gene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.