RASAL2 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with RASAL2 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with RASAL2 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with RASAL2 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with RASAL2 Down.

Results found

Linked to

	Label	Description
	VPS4B Gene (Entity type)	ENSG00000119541 - vacuolar protein sorting 4 homolog B
	POLR3E Gene (Entity type)	ENSG00000058600 - RNA polymerase III subunit E
	CREBBP Gene (Entity type)	ENSG00000005339 - CREB binding lysine acetyltransferase
	GOLGA4 Gene (Entity type)	ENSG00000144674 - golgin A4
	GTF3C1 Gene (Entity type)	ENSG00000077235 - general transcription factor IIIC subunit 1
	AP3D1 Gene (Entity type)	ENSG00000065000 - adaptor related protein complex 3 subunit delta 1
	VPS35L Gene (Entity type)	ENSG00000103544 - VPS35 endosomal protein sorting factor like
	CLCN7 Gene (Entity type)	ENSG00000103249 - Cl-/H+ antiporter 7
	RBBP6 Gene (Entity type)	ENSG00000122257 - RB binding protein 6, ubiquitin ligase
	USP47 Gene (Entity type)	ENSG00000170242 - ubiquitin specific peptidase 47

VPS4B

Gene (Entity type)

ENSG00000119541 - vacuolar protein sorting 4 homolog B

POLR3E

Gene (Entity type)

ENSG00000058600 - RNA polymerase III subunit E

CREBBP

Gene (Entity type)

ENSG00000005339 - CREB binding lysine acetyltransferase

GOLGA4

Gene (Entity type)

ENSG00000144674 - golgin A4

GTF3C1

Gene (Entity type)

ENSG00000077235 - general transcription factor IIIC subunit 1

AP3D1

Gene (Entity type)

ENSG00000065000 - adaptor related protein complex 3 subunit delta 1

VPS35L

Gene (Entity type)

ENSG00000103544 - VPS35 endosomal protein sorting factor like

CLCN7

Gene (Entity type)

ENSG00000103249 - Cl-/H+ antiporter 7

RBBP6

Gene (Entity type)

ENSG00000122257 - RB binding protein 6, ubiquitin ligase

USP47

Gene (Entity type)

ENSG00000170242 - ubiquitin specific peptidase 47

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.