GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 3 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_1_human_up.

Results found

Linked to

	Label	Description
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	RFK Gene (Entity type)	ENSG00000135002 - riboflavin kinase
	ROCK2 Gene (Entity type)	ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	NRG1 Gene (Entity type)	ENSG00000157168 - neuregulin 1
	ULK1 Gene (Entity type)	ENSG00000177169 - unc-51 like autophagy activating kinase 1
	VSIR Gene (Entity type)	ENSG00000107738 - V-set immunoregulatory receptor
	USP9X Gene (Entity type)	ENSG00000124486 - ubiquitin specific peptidase 9 X-linked
	MANBA Gene (Entity type)	ENSG00000109323 - mannosidase beta

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

RFK

Gene (Entity type)

ENSG00000135002 - riboflavin kinase

ROCK2

Gene (Entity type)

ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

NRG1

Gene (Entity type)

ENSG00000157168 - neuregulin 1

ULK1

Gene (Entity type)

ENSG00000177169 - unc-51 like autophagy activating kinase 1

VSIR

Gene (Entity type)

ENSG00000107738 - V-set immunoregulatory receptor

USP9X

Gene (Entity type)

ENSG00000124486 - ubiquitin specific peptidase 9 X-linked

MANBA

Gene (Entity type)

ENSG00000109323 - mannosidase beta

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.