GSE195559 NOTCH1 knockout endothelial cell cardiac muscle cell stem cell 3 v 1 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE195559_NOTCH1 knockout_endothelial cell_cardiac muscle cell_stem cell_3_v_1_human_up.

Results found

Linked to

	Label	Description
	FGD5-AS1 Gene (Entity type)	FGD5 antisense RNA 1
	LINC01278 Gene (Entity type)	long intergenic non-protein coding RNA 1278
	ANKRD33BP1 Gene (Entity type)	ANKRD33B pseudogene 1
	LOC105369250 Gene (Entity type)	uncharacterized LOC105369250
	MTCO1P40 Gene (Entity type)	MT-CO1 pseudogene 40
	LOC105377225 Gene (Entity type)	uncharacterized LOC105377225
	WTAPP1 Gene (Entity type)	WTAP pseudogene 1
	MTCO3P12 Gene (Entity type)	MT-CO3 pseudogene 12
	MEF2C-AS2 Gene (Entity type)	MEF2C antisense RNA 2
	C3orf36 Gene (Entity type)	chromosome 3 putative open reading frame 36

FGD5-AS1

Gene (Entity type)

FGD5 antisense RNA 1

LINC01278

Gene (Entity type)

long intergenic non-protein coding RNA 1278

ANKRD33BP1

Gene (Entity type)

ANKRD33B pseudogene 1

LOC105369250

Gene (Entity type)

uncharacterized LOC105369250

MTCO1P40

Gene (Entity type)

MT-CO1 pseudogene 40

LOC105377225

Gene (Entity type)

uncharacterized LOC105377225

WTAPP1

Gene (Entity type)

WTAP pseudogene 1

MTCO3P12

Gene (Entity type)

MT-CO3 pseudogene 12

MEF2C-AS2

Gene (Entity type)

MEF2C antisense RNA 2

C3orf36

Gene (Entity type)

chromosome 3 putative open reading frame 36

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.