DOLK Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with DOLK Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with DOLK Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with DOLK Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with DOLK Up.

Results found

Linked to

	Label	Description
	GSK3B Gene (Entity type)	ENSG00000082701 - glycogen synthase kinase 3 beta
	DAP Gene (Entity type)	ENSG00000112977 - death associated protein
	ACOX1 Gene (Entity type)	ENSG00000161533 - acyl-CoA oxidase 1
	TDP1 Gene (Entity type)	ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1
	MMP16 Gene (Entity type)	ENSG00000156103 - matrix metallopeptidase 16
	CSPG4 Gene (Entity type)	ENSG00000173546 - chondroitin sulfate proteoglycan 4
	PSMD12 Gene (Entity type)	ENSG00000197170 - proteasome 26S subunit, non-ATPase 12
	ATP5MC1 Gene (Entity type)	ENSG00000159199 - ATP synthase membrane subunit c locus 1
	MNS1 Gene (Entity type)	ENSG00000138587 - meiosis specific nuclear structural 1
	NHP2 Gene (Entity type)	ENSG00000145912 - NHP2 ribonucleoprotein

GSK3B

Gene (Entity type)

ENSG00000082701 - glycogen synthase kinase 3 beta

DAP

Gene (Entity type)

ENSG00000112977 - death associated protein

ACOX1

Gene (Entity type)

ENSG00000161533 - acyl-CoA oxidase 1

TDP1

Gene (Entity type)

ENSG00000042088 - tyrosyl-DNA phosphodiesterase 1

MMP16

Gene (Entity type)

ENSG00000156103 - matrix metallopeptidase 16

CSPG4

Gene (Entity type)

ENSG00000173546 - chondroitin sulfate proteoglycan 4

PSMD12

Gene (Entity type)

ENSG00000197170 - proteasome 26S subunit, non-ATPase 12

ATP5MC1

Gene (Entity type)

ENSG00000159199 - ATP synthase membrane subunit c locus 1

MNS1

Gene (Entity type)

ENSG00000138587 - meiosis specific nuclear structural 1

NHP2

Gene (Entity type)

ENSG00000145912 - NHP2 ribonucleoprotein

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.