DAO Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with DAO Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with DAO Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with DAO Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with DAO Up.

Results found

Linked to

	Label	Description
	SLC22A5 Gene (Entity type)	ENSG00000197375 - solute carrier family 22 member 5
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	LRPAP1 Gene (Entity type)	ENSG00000163956 - LDL receptor related protein associated protein 1
	CALB2 Gene (Entity type)	ENSG00000172137 - calbindin 2
	BUD31 Gene (Entity type)	ENSG00000106245 - BUD31 spliceosome associated protein
	SPIB Gene (Entity type)	ENSG00000269404 - Spi-B transcription factor
	SMURF1 Gene (Entity type)	ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1
	ME3 Gene (Entity type)	ENSG00000151376 - malic enzyme 3
	CSNK2A1 Gene (Entity type)	ENSG00000101266 - casein kinase 2 alpha 1
	USH1C Gene (Entity type)	ENSG00000006611 - USH1 protein network component harmonin

SLC22A5

Gene (Entity type)

ENSG00000197375 - solute carrier family 22 member 5

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

LRPAP1

Gene (Entity type)

ENSG00000163956 - LDL receptor related protein associated protein 1

CALB2

Gene (Entity type)

ENSG00000172137 - calbindin 2

BUD31

Gene (Entity type)

ENSG00000106245 - BUD31 spliceosome associated protein

SPIB

Gene (Entity type)

ENSG00000269404 - Spi-B transcription factor

SMURF1

Gene (Entity type)

ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1

ME3

Gene (Entity type)

ENSG00000151376 - malic enzyme 3

CSNK2A1

Gene (Entity type)

ENSG00000101266 - casein kinase 2 alpha 1

USH1C

Gene (Entity type)

ENSG00000006611 - USH1 protein network component harmonin

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.