GSE230865 EYA2 knockdown 3 v 4 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE230865_EYA2 knockdown_3_v_4_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE230865_EYA2 knockdown_3_v_4_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE230865_EYA2 knockdown_3_v_4_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE230865_EYA2 knockdown_3_v_4_human_up.

Results found

Linked to

	Label	Description
	SMAD2 Gene (Entity type)	ENSG00000175387 - SMAD family member 2
	EXT2 Gene (Entity type)	ENSG00000151348 - exostosin glycosyltransferase 2
	MEGF9 Gene (Entity type)	ENSG00000106780 - multiple EGF like domains 9
	IDH3B Gene (Entity type)	ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta
	NME3 Gene (Entity type)	ENSG00000103024 - NME/NM23 nucleoside diphosphate kinase 3
	SLC6A9 Gene (Entity type)	ENSG00000196517 - solute carrier family 6 member 9
	STK17B Gene (Entity type)	ENSG00000081320 - serine/threonine kinase 17b
	SCCPDH Gene (Entity type)	ENSG00000143653 - saccharopine dehydrogenase (putative)
	IL17RA Gene (Entity type)	ENSG00000177663 - interleukin 17 receptor A
	VWA1 Gene (Entity type)	ENSG00000179403 - von Willebrand factor A domain containing 1

SMAD2

Gene (Entity type)

ENSG00000175387 - SMAD family member 2

EXT2

Gene (Entity type)

ENSG00000151348 - exostosin glycosyltransferase 2

MEGF9

Gene (Entity type)

ENSG00000106780 - multiple EGF like domains 9

IDH3B

Gene (Entity type)

ENSG00000101365 - isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

NME3

Gene (Entity type)

ENSG00000103024 - NME/NM23 nucleoside diphosphate kinase 3

SLC6A9

Gene (Entity type)

ENSG00000196517 - solute carrier family 6 member 9

STK17B

Gene (Entity type)

ENSG00000081320 - serine/threonine kinase 17b

SCCPDH

Gene (Entity type)

ENSG00000143653 - saccharopine dehydrogenase (putative)

IL17RA

Gene (Entity type)

ENSG00000177663 - interleukin 17 receptor A

VWA1

Gene (Entity type)

ENSG00000179403 - von Willebrand factor A domain containing 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.