GSE144843 GSE144844 SMARCA2 SMARCA4 knockdown 5 v 3 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE144843_GSE144844_SMARCA2_SMARCA4 knockdown_5_v_3_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE144843_GSE144844_SMARCA2_SMARCA4 knockdown_5_v_3_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE144843_GSE144844_SMARCA2_SMARCA4 knockdown_5_v_3_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE144843_GSE144844_SMARCA2_SMARCA4 knockdown_5_v_3_human_up.

Results found

Linked to

	Label	Description
	ASMTL Gene (Entity type)	acetylserotonin O-methyltransferase like
	SNHG16 Gene (Entity type)	small nucleolar RNA host gene 16
	PAX8-AS1 Gene (Entity type)	PAX8 antisense RNA 1
	ZFAS1 Gene (Entity type)	ZNFX1 antisense RNA 1
	ZNF883 Gene (Entity type)	zinc finger protein 883
	TMPO-AS1 Gene (Entity type)	TMPO antisense RNA 1
	USP2-AS1 Gene (Entity type)	USP2 antisense RNA 1
	LOC645485 Gene (Entity type)	uncharacterized LOC645485
	LINC00707 Gene (Entity type)	long intergenic non-protein coding RNA 707
	ZNF702P Gene (Entity type)	zinc finger protein 702, pseudogene

ASMTL

Gene (Entity type)

acetylserotonin O-methyltransferase like

SNHG16

Gene (Entity type)

small nucleolar RNA host gene 16

PAX8-AS1

Gene (Entity type)

PAX8 antisense RNA 1

ZFAS1

Gene (Entity type)

ZNFX1 antisense RNA 1

ZNF883

Gene (Entity type)

zinc finger protein 883

TMPO-AS1

Gene (Entity type)

TMPO antisense RNA 1

USP2-AS1

Gene (Entity type)

USP2 antisense RNA 1

LOC645485

Gene (Entity type)

uncharacterized LOC645485

LINC00707

Gene (Entity type)

long intergenic non-protein coding RNA 707

ZNF702P

Gene (Entity type)

zinc finger protein 702, pseudogene

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.