GSE228619 cadherin-11 CDH11 knockdown RNA Small Interfering 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE228619_cadherin-11_CDH11 knockdown_RNA Small Interfering_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE228619_cadherin-11_CDH11 knockdown_RNA Small Interfering_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE228619_cadherin-11_CDH11 knockdown_RNA Small Interfering_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE228619_cadherin-11_CDH11 knockdown_RNA Small Interfering_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	RPS6 Gene (Entity type)	ENSG00000137154 - ribosomal protein S6
	CPNE3 Gene (Entity type)	ENSG00000085719 - copine 3
	ROCK2 Gene (Entity type)	ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2
	SMAD4 Gene (Entity type)	ENSG00000141646 - SMAD family member 4
	S1PR3 Gene (Entity type)	ENSG00000213694 - sphingosine-1-phosphate receptor 3
	MEGF9 Gene (Entity type)	ENSG00000106780 - multiple EGF like domains 9
	C2 Gene (Entity type)	ENSG00000166278 - complement C2
	ADCY3 Gene (Entity type)	ENSG00000138031 - adenylate cyclase 3
	HLA-DMA Gene (Entity type)	ENSG00000204257 - major histocompatibility complex, class II, DM alpha
	PTGR1 Gene (Entity type)	ENSG00000106853 - prostaglandin reductase 1

RPS6

Gene (Entity type)

ENSG00000137154 - ribosomal protein S6

CPNE3

Gene (Entity type)

ENSG00000085719 - copine 3

ROCK2

Gene (Entity type)

ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2

SMAD4

Gene (Entity type)

ENSG00000141646 - SMAD family member 4

S1PR3

Gene (Entity type)

ENSG00000213694 - sphingosine-1-phosphate receptor 3

MEGF9

Gene (Entity type)

ENSG00000106780 - multiple EGF like domains 9

Gene (Entity type)

ENSG00000166278 - complement C2

ADCY3

Gene (Entity type)

ENSG00000138031 - adenylate cyclase 3

HLA-DMA

Gene (Entity type)

ENSG00000204257 - major histocompatibility complex, class II, DM alpha

PTGR1

Gene (Entity type)

ENSG00000106853 - prostaglandin reductase 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.