GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 8 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_up.

Results found

Linked to

	Label	Description
	PLOD3 Gene (Entity type)	ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	CD79B Gene (Entity type)	ENSG00000007312 - CD79b molecule
	CROT Gene (Entity type)	ENSG00000005469 - carnitine O-octanoyltransferase
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor
	ADAM15 Gene (Entity type)	ENSG00000143537 - ADAM metallopeptidase domain 15
	ACOX1 Gene (Entity type)	ENSG00000161533 - acyl-CoA oxidase 1
	STK17B Gene (Entity type)	ENSG00000081320 - serine/threonine kinase 17b
	BCL2L13 Gene (Entity type)	ENSG00000099968 - BCL2 like 13
	FBXW2 Gene (Entity type)	ENSG00000119402 - F-box and WD repeat domain containing 2

PLOD3

Gene (Entity type)

ENSG00000106397 - procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

CD79B

Gene (Entity type)

ENSG00000007312 - CD79b molecule

CROT

Gene (Entity type)

ENSG00000005469 - carnitine O-octanoyltransferase

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

ADAM15

Gene (Entity type)

ENSG00000143537 - ADAM metallopeptidase domain 15

ACOX1

Gene (Entity type)

ENSG00000161533 - acyl-CoA oxidase 1

STK17B

Gene (Entity type)

ENSG00000081320 - serine/threonine kinase 17b

BCL2L13

Gene (Entity type)

ENSG00000099968 - BCL2 like 13

FBXW2

Gene (Entity type)

ENSG00000119402 - F-box and WD repeat domain containing 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.