GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 8 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_8_human_up.

Results found

Linked to

	Label	Description
	VAMP7 Gene (Entity type)	vesicle associated membrane protein 7
	H19 Gene (Entity type)	H19 imprinted maternally expressed transcript
	LINC00665 Gene (Entity type)	long intergenic non-protein coding RNA 665
	MIR34AHG Gene (Entity type)	MIR34A host gene
	LINC01963 Gene (Entity type)	long intergenic non-protein coding RNA 1963
	TPTEP1 Gene (Entity type)	TPTE pseudogene 1
	FIRRE Gene (Entity type)	firre intergenic repeating RNA element
	DGCR5 Gene (Entity type)	DiGeorge syndrome critical region gene 5
	PCAT7 Gene (Entity type)	prostate cancer associated transcript 7
	HLA-F-AS1 Gene (Entity type)	HLA-F antisense RNA 1

VAMP7

Gene (Entity type)

vesicle associated membrane protein 7

H19

Gene (Entity type)

H19 imprinted maternally expressed transcript

LINC00665

Gene (Entity type)

long intergenic non-protein coding RNA 665

MIR34AHG

Gene (Entity type)

MIR34A host gene

LINC01963

Gene (Entity type)

long intergenic non-protein coding RNA 1963

TPTEP1

Gene (Entity type)

TPTE pseudogene 1

FIRRE

Gene (Entity type)

firre intergenic repeating RNA element

DGCR5

Gene (Entity type)

DiGeorge syndrome critical region gene 5

PCAT7

Gene (Entity type)

prostate cancer associated transcript 7

HLA-F-AS1

Gene (Entity type)

HLA-F antisense RNA 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.