GSE139261 PDX SOX10 overexpression G144 2 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

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Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139261_PDX_SOX10 overexpression_G144_2_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139261_PDX_SOX10 overexpression_G144_2_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139261_PDX_SOX10 overexpression_G144_2_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139261_PDX_SOX10 overexpression_G144_2_v_0_human_dn.

Results found

Linked to

	Label	Description
	VARS1 Gene (Entity type)	ENSG00000204394 - valyl-tRNA synthetase 1
	AKAP17A Gene (Entity type)	ENSG00000292343 - A-kinase anchoring protein 17A
	MIR4435-2HG Gene (Entity type)	ENSG00000172965 - MIR4435-2 host gene
	RPSA2 Gene (Entity type)	ENSG00000288920 - ribosomal protein SA 2
	GTPBP6 Gene (Entity type)	ENSG00000292358 - GTP binding protein 6
	POU3F3 Gene (Entity type)	ENSG00000269707 - POU class 3 homeobox 3
	GTF2IP4 Gene (Entity type)	ENSG00000293241 - general transcription factor IIi pseudogene 4
	TALAM1 Gene (Entity type)	ENSG00000289740 - TALAM1 transcript, MALAT1 antisense RNA
	BCYRN1 Gene (Entity type)	ENSG00000236824 - brain cytoplasmic RNA 1
	SMIM48 Gene (Entity type)	ENSG00000286190 - small integral membrane protein 48

VARS1

Gene (Entity type)

ENSG00000204394 - valyl-tRNA synthetase 1

AKAP17A

Gene (Entity type)

ENSG00000292343 - A-kinase anchoring protein 17A

MIR4435-2HG

Gene (Entity type)

ENSG00000172965 - MIR4435-2 host gene

RPSA2

Gene (Entity type)

ENSG00000288920 - ribosomal protein SA 2

GTPBP6

Gene (Entity type)

ENSG00000292358 - GTP binding protein 6

POU3F3

Gene (Entity type)

ENSG00000269707 - POU class 3 homeobox 3

GTF2IP4

Gene (Entity type)

ENSG00000293241 - general transcription factor IIi pseudogene 4

TALAM1

Gene (Entity type)

ENSG00000289740 - TALAM1 transcript, MALAT1 antisense RNA

BCYRN1

Gene (Entity type)

ENSG00000236824 - brain cytoplasmic RNA 1

SMIM48

Gene (Entity type)

ENSG00000286190 - small integral membrane protein 48

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.