GSE139178 GDC-0068 3 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139178_GDC-0068_3_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139178_GDC-0068_3_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139178_GDC-0068_3_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139178_GDC-0068_3_v_1_human_up.

Results found

Linked to

	Label	Description
	GTF2IP4 Gene (Entity type)	ENSG00000293241 - general transcription factor IIi pseudogene 4
	CASTOR3P Gene (Entity type)	ENSG00000291122 - CASTOR family member 3, pseudogene
	LINC00667 Gene (Entity type)	ENSG00000263753 - long intergenic non-protein coding RNA 667
	DUBR Gene (Entity type)	ENSG00000243701 - DPPA2 upstream binding RNA
	ATP6V1G2 Gene (Entity type)	ENSG00000213760 - ATPase H+ transporting V1 subunit G2
	LOXL1-AS1 Gene (Entity type)	ENSG00000261801 - LOXL1 antisense RNA 1
	SYT15B Gene (Entity type)	ENSG00000277758 - synaptotagmin 15B
	PSMG3-AS1 Gene (Entity type)	ENSG00000230487 - PSMG3 antisense RNA 1
	C22orf46P Gene (Entity type)	ENSG00000293428 - CTA-216E10.6
	EBLN3P Gene (Entity type)	ENSG00000281649 - endogenous Bornavirus like nucleoprotein 3, pseudogene

GTF2IP4

Gene (Entity type)

ENSG00000293241 - general transcription factor IIi pseudogene 4

CASTOR3P

Gene (Entity type)

ENSG00000291122 - CASTOR family member 3, pseudogene

LINC00667

Gene (Entity type)

ENSG00000263753 - long intergenic non-protein coding RNA 667

DUBR

Gene (Entity type)

ENSG00000243701 - DPPA2 upstream binding RNA

ATP6V1G2

Gene (Entity type)

ENSG00000213760 - ATPase H+ transporting V1 subunit G2

LOXL1-AS1

Gene (Entity type)

ENSG00000261801 - LOXL1 antisense RNA 1

SYT15B

Gene (Entity type)

ENSG00000277758 - synaptotagmin 15B

PSMG3-AS1

Gene (Entity type)

ENSG00000230487 - PSMG3 antisense RNA 1

C22orf46P

Gene (Entity type)

ENSG00000293428 - CTA-216E10.6

EBLN3P

Gene (Entity type)

ENSG00000281649 - endogenous Bornavirus like nucleoprotein 3, pseudogene

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.