GCSH Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GCSH Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GCSH Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GCSH Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GCSH Up.

Results found

Linked to

	Label	Description
	NFU1 Gene (Entity type)	ENSG00000169599 - NFU1 iron-sulfur cluster scaffold
	IGSF6 Gene (Entity type)	ENSG00000140749 - immunoglobulin superfamily member 6
	ARFGEF1 Gene (Entity type)	ENSG00000066777 - ARF guanine nucleotide exchange factor 1
	AMZ2 Gene (Entity type)	ENSG00000196704 - archaelysin family metallopeptidase 2
	CHCHD2 Gene (Entity type)	ENSG00000106153 - coiled-coil-helix-coiled-coil-helix domain containing 2
	BBOF1 Gene (Entity type)	ENSG00000119636 - basal body orientation factor 1
	SIRT5 Gene (Entity type)	ENSG00000124523 - sirtuin 5
	AMT Gene (Entity type)	ENSG00000145020 - aminomethyltransferase
	PBX2 Gene (Entity type)	ENSG00000204304 - PBX homeobox 2
	MRS2 Gene (Entity type)	ENSG00000124532 - magnesium transporter MRS2

NFU1

Gene (Entity type)

ENSG00000169599 - NFU1 iron-sulfur cluster scaffold

IGSF6

Gene (Entity type)

ENSG00000140749 - immunoglobulin superfamily member 6

ARFGEF1

Gene (Entity type)

ENSG00000066777 - ARF guanine nucleotide exchange factor 1

AMZ2

Gene (Entity type)

ENSG00000196704 - archaelysin family metallopeptidase 2

CHCHD2

Gene (Entity type)

ENSG00000106153 - coiled-coil-helix-coiled-coil-helix domain containing 2

BBOF1

Gene (Entity type)

ENSG00000119636 - basal body orientation factor 1

SIRT5

Gene (Entity type)

ENSG00000124523 - sirtuin 5

AMT

Gene (Entity type)

ENSG00000145020 - aminomethyltransferase

PBX2

Gene (Entity type)

ENSG00000204304 - PBX homeobox 2

MRS2

Gene (Entity type)

ENSG00000124532 - magnesium transporter MRS2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.