CHD2 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CHD2 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CHD2 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CHD2 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CHD2 Down.

Results found

Linked to

	Label	Description
	UQCRC1 Gene (Entity type)	ENSG00000010256 - ubiquinol-cytochrome c reductase core protein 1
	MGMT Gene (Entity type)	ENSG00000170430 - O-6-methylguanine-DNA methyltransferase
	STYXL1 Gene (Entity type)	ENSG00000127952 - serine/threonine/tyrosine interacting like 1
	ST3GAL4 Gene (Entity type)	ENSG00000110080 - ST3 beta-galactoside alpha-2,3-sialyltransferase 4
	FARS2 Gene (Entity type)	ENSG00000145982 - phenylalanyl-tRNA synthetase 2, mitochondrial
	SIRT5 Gene (Entity type)	ENSG00000124523 - sirtuin 5
	PTOV1 Gene (Entity type)	ENSG00000104960 - PTOV1 extended AT-hook containing adaptor protein
	SDHAF1 Gene (Entity type)	ENSG00000205138 - succinate dehydrogenase complex assembly factor 1
	TMEM187 Gene (Entity type)	ENSG00000177854 - transmembrane protein 187
	BATF3 Gene (Entity type)	ENSG00000123685 - basic leucine zipper ATF-like transcription factor 3

UQCRC1

Gene (Entity type)

ENSG00000010256 - ubiquinol-cytochrome c reductase core protein 1

MGMT

Gene (Entity type)

ENSG00000170430 - O-6-methylguanine-DNA methyltransferase

STYXL1

Gene (Entity type)

ENSG00000127952 - serine/threonine/tyrosine interacting like 1

ST3GAL4

Gene (Entity type)

ENSG00000110080 - ST3 beta-galactoside alpha-2,3-sialyltransferase 4

FARS2

Gene (Entity type)

ENSG00000145982 - phenylalanyl-tRNA synthetase 2, mitochondrial

SIRT5

Gene (Entity type)

ENSG00000124523 - sirtuin 5

PTOV1

Gene (Entity type)

ENSG00000104960 - PTOV1 extended AT-hook containing adaptor protein

SDHAF1

Gene (Entity type)

ENSG00000205138 - succinate dehydrogenase complex assembly factor 1

TMEM187

Gene (Entity type)

ENSG00000177854 - transmembrane protein 187

BATF3

Gene (Entity type)

ENSG00000123685 - basic leucine zipper ATF-like transcription factor 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.