C4BPB Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with C4BPB Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with C4BPB Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with C4BPB Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with C4BPB Up.

Results found

Linked to

	Label	Description
	SEC16A Gene (Entity type)	ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor
	NME3 Gene (Entity type)	ENSG00000103024 - NME/NM23 nucleoside diphosphate kinase 3
	MACROD1 Gene (Entity type)	ENSG00000133315 - mono-ADP ribosylhydrolase 1
	STK25 Gene (Entity type)	ENSG00000115694 - serine/threonine kinase 25
	SIM2 Gene (Entity type)	ENSG00000159263 - SIM bHLH transcription factor 2
	AP3D1 Gene (Entity type)	ENSG00000065000 - adaptor related protein complex 3 subunit delta 1
	PNPLA6 Gene (Entity type)	ENSG00000032444 - patatin like domain 6, lysophospholipase
	APH1A Gene (Entity type)	ENSG00000117362 - aph-1A gamma-secretase subunit
	CST4 Gene (Entity type)	ENSG00000101441 - cystatin S
	PRRC2B Gene (Entity type)	ENSG00000288701 - proline rich coiled-coil 2B

SEC16A

Gene (Entity type)

ENSG00000148396 - SEC16 homolog A, endoplasmic reticulum export factor

NME3

Gene (Entity type)

ENSG00000103024 - NME/NM23 nucleoside diphosphate kinase 3

MACROD1

Gene (Entity type)

ENSG00000133315 - mono-ADP ribosylhydrolase 1

STK25

Gene (Entity type)

ENSG00000115694 - serine/threonine kinase 25

SIM2

Gene (Entity type)

ENSG00000159263 - SIM bHLH transcription factor 2

AP3D1

Gene (Entity type)

ENSG00000065000 - adaptor related protein complex 3 subunit delta 1

PNPLA6

Gene (Entity type)

ENSG00000032444 - patatin like domain 6, lysophospholipase

APH1A

Gene (Entity type)

ENSG00000117362 - aph-1A gamma-secretase subunit

CST4

Gene (Entity type)

ENSG00000101441 - cystatin S

PRRC2B

Gene (Entity type)

ENSG00000288701 - proline rich coiled-coil 2B

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Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.