GSE139540 menadione 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE139540_menadione_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE139540_menadione_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE139540_menadione_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE139540_menadione_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	NRAS Gene (Entity type)	ENSG00000213281 - NRAS proto-oncogene, GTPase
	ATMIN Gene (Entity type)	ENSG00000166454 - ATM interactor
	DYNLL2 Gene (Entity type)	ENSG00000264364 - dynein light chain LC8-type 2
	TM9SF2 Gene (Entity type)	ENSG00000125304 - transmembrane 9 superfamily member 2
	ARF6 Gene (Entity type)	ENSG00000165527 - ARF GTPase 6
	TDG Gene (Entity type)	ENSG00000139372 - thymine DNA glycosylase
	GTF2H3 Gene (Entity type)	ENSG00000111358 - general transcription factor IIH subunit 3
	NPEPPS Gene (Entity type)	ENSG00000141279 - aminopeptidase puromycin sensitive
	VWA1 Gene (Entity type)	ENSG00000179403 - von Willebrand factor A domain containing 1

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

NRAS

Gene (Entity type)

ENSG00000213281 - NRAS proto-oncogene, GTPase

ATMIN

Gene (Entity type)

ENSG00000166454 - ATM interactor

DYNLL2

Gene (Entity type)

ENSG00000264364 - dynein light chain LC8-type 2

TM9SF2

Gene (Entity type)

ENSG00000125304 - transmembrane 9 superfamily member 2

ARF6

Gene (Entity type)

ENSG00000165527 - ARF GTPase 6

TDG

Gene (Entity type)

ENSG00000139372 - thymine DNA glycosylase

GTF2H3

Gene (Entity type)

ENSG00000111358 - general transcription factor IIH subunit 3

NPEPPS

Gene (Entity type)

ENSG00000141279 - aminopeptidase puromycin sensitive

VWA1

Gene (Entity type)

ENSG00000179403 - von Willebrand factor A domain containing 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.