GSE150244 TRIM8 knockout 3 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE150244_TRIM8 knockout_3_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE150244_TRIM8 knockout_3_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE150244_TRIM8 knockout_3_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE150244_TRIM8 knockout_3_v_0_human_dn.

Results found

Linked to

	Label	Description
	BRAF Gene (Entity type)	ENSG00000157764 - B-Raf proto-oncogene, serine/threonine kinase
	KDM5A Gene (Entity type)	ENSG00000073614 - lysine demethylase 5A
	HDAC6 Gene (Entity type)	ENSG00000094631 - histone deacetylase 6
	CPNE3 Gene (Entity type)	ENSG00000085719 - copine 3
	PLCG1 Gene (Entity type)	ENSG00000124181 - phospholipase C gamma 1
	ROCK2 Gene (Entity type)	ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2
	SLC22A5 Gene (Entity type)	ENSG00000197375 - solute carrier family 22 member 5
	ERN1 Gene (Entity type)	ENSG00000178607 - endoplasmic reticulum to nucleus signaling 1
	TRIM24 Gene (Entity type)	ENSG00000122779 - tripartite motif containing 24
	SMC3 Gene (Entity type)	ENSG00000108055 - structural maintenance of chromosomes 3

BRAF

Gene (Entity type)

ENSG00000157764 - B-Raf proto-oncogene, serine/threonine kinase

KDM5A

Gene (Entity type)

ENSG00000073614 - lysine demethylase 5A

HDAC6

Gene (Entity type)

ENSG00000094631 - histone deacetylase 6

CPNE3

Gene (Entity type)

ENSG00000085719 - copine 3

PLCG1

Gene (Entity type)

ENSG00000124181 - phospholipase C gamma 1

ROCK2

Gene (Entity type)

ENSG00000134318 - Rho associated coiled-coil containing protein kinase 2

SLC22A5

Gene (Entity type)

ENSG00000197375 - solute carrier family 22 member 5

ERN1

Gene (Entity type)

ENSG00000178607 - endoplasmic reticulum to nucleus signaling 1

TRIM24

Gene (Entity type)

ENSG00000122779 - tripartite motif containing 24

SMC3

Gene (Entity type)

ENSG00000108055 - structural maintenance of chromosomes 3

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.