PIPOX Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PIPOX Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PIPOX Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PIPOX Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PIPOX Up.

Results found

Linked to

	Label	Description
	HDHD3 Gene (Entity type)	ENSG00000119431 - haloacid dehalogenase like hydrolase domain containing 3
	FIG4 Gene (Entity type)	ENSG00000112367 - FIG4 phosphoinositide 5-phosphatase
	STOML2 Gene (Entity type)	ENSG00000165283 - stomatin like 2
	RPA2 Gene (Entity type)	ENSG00000117748 - replication protein A2
	GEMIN2 Gene (Entity type)	ENSG00000092208 - gem nuclear organelle associated protein 2
	DCTN3 Gene (Entity type)	ENSG00000137100 - dynactin subunit 3
	MIA3 Gene (Entity type)	ENSG00000154305 - MIA SH3 domain ER export factor 3
	ARHGDIA Gene (Entity type)	ENSG00000141522 - Rho GDP dissociation inhibitor alpha
	FBXO28 Gene (Entity type)	ENSG00000143756 - F-box protein 28
	CBFA2T2 Gene (Entity type)	ENSG00000078699 - CBFA2/RUNX1 partner transcriptional co-repressor 2

HDHD3

Gene (Entity type)

ENSG00000119431 - haloacid dehalogenase like hydrolase domain containing 3

FIG4

Gene (Entity type)

ENSG00000112367 - FIG4 phosphoinositide 5-phosphatase

STOML2

Gene (Entity type)

ENSG00000165283 - stomatin like 2

RPA2

Gene (Entity type)

ENSG00000117748 - replication protein A2

GEMIN2

Gene (Entity type)

ENSG00000092208 - gem nuclear organelle associated protein 2

DCTN3

Gene (Entity type)

ENSG00000137100 - dynactin subunit 3

MIA3

Gene (Entity type)

ENSG00000154305 - MIA SH3 domain ER export factor 3

ARHGDIA

Gene (Entity type)

ENSG00000141522 - Rho GDP dissociation inhibitor alpha

FBXO28

Gene (Entity type)

ENSG00000143756 - F-box protein 28

CBFA2T2

Gene (Entity type)

ENSG00000078699 - CBFA2/RUNX1 partner transcriptional co-repressor 2

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.