CD53 Down (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with CD53 Down.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with CD53 Down.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with CD53 Down.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with CD53 Down.

Results found

Linked to

	Label	Description
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	HDAC5 Gene (Entity type)	ENSG00000108840 - histone deacetylase 5
	SENP6 Gene (Entity type)	ENSG00000112701 - SUMO specific peptidase 6
	DLGAP4 Gene (Entity type)	ENSG00000080845 - DLG associated protein 4
	RAB6A Gene (Entity type)	ENSG00000175582 - RAB6A, member RAS oncogene family
	SMURF1 Gene (Entity type)	ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1
	ATP2C1 Gene (Entity type)	ENSG00000017260 - ATPase secretory pathway Ca2+ transporting 1
	VAMP2 Gene (Entity type)	ENSG00000220205 - vesicle associated membrane protein 2
	NISCH Gene (Entity type)	ENSG00000010322 - nischarin
	ATP5MF Gene (Entity type)	ENSG00000241468 - ATP synthase membrane subunit f

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

HDAC5

Gene (Entity type)

ENSG00000108840 - histone deacetylase 5

SENP6

Gene (Entity type)

ENSG00000112701 - SUMO specific peptidase 6

DLGAP4

Gene (Entity type)

ENSG00000080845 - DLG associated protein 4

RAB6A

Gene (Entity type)

ENSG00000175582 - RAB6A, member RAS oncogene family

SMURF1

Gene (Entity type)

ENSG00000198742 - SMAD specific E3 ubiquitin protein ligase 1

ATP2C1

Gene (Entity type)

ENSG00000017260 - ATPase secretory pathway Ca2+ transporting 1

VAMP2

Gene (Entity type)

ENSG00000220205 - vesicle associated membrane protein 2

NISCH

Gene (Entity type)

ENSG00000010322 - nischarin

ATP5MF

Gene (Entity type)

ENSG00000241468 - ATP synthase membrane subunit f

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Community

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.