GSE176008 pyridoxine 0 v 3 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE176008_pyridoxine_0_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE176008_pyridoxine_0_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE176008_pyridoxine_0_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE176008_pyridoxine_0_v_3_human_dn.

Results found

Linked to

	Label	Description
	PPP2R2C Gene (Entity type)	ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma
	PTGR1 Gene (Entity type)	ENSG00000106853 - prostaglandin reductase 1
	TGFBR1 Gene (Entity type)	ENSG00000106799 - transforming growth factor beta receptor 1
	NET1 Gene (Entity type)	ENSG00000173848 - neuroepithelial cell transforming 1
	PRICKLE1 Gene (Entity type)	ENSG00000139174 - prickle planar cell polarity protein 1
	CDC42EP1 Gene (Entity type)	ENSG00000128283 - CDC42 effector protein 1
	RUNX1T1 Gene (Entity type)	ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1
	SERF2 Gene (Entity type)	ENSG00000140264 - small EDRK-rich factor 2
	AMPD2 Gene (Entity type)	ENSG00000116337 - adenosine monophosphate deaminase 2
	MMP13 Gene (Entity type)	ENSG00000137745 - matrix metallopeptidase 13

PPP2R2C

Gene (Entity type)

ENSG00000074211 - protein phosphatase 2 regulatory subunit Bgamma

PTGR1

Gene (Entity type)

ENSG00000106853 - prostaglandin reductase 1

TGFBR1

Gene (Entity type)

ENSG00000106799 - transforming growth factor beta receptor 1

NET1

Gene (Entity type)

ENSG00000173848 - neuroepithelial cell transforming 1

PRICKLE1

Gene (Entity type)

ENSG00000139174 - prickle planar cell polarity protein 1

CDC42EP1

Gene (Entity type)

ENSG00000128283 - CDC42 effector protein 1

RUNX1T1

Gene (Entity type)

ENSG00000079102 - RUNX1 partner transcriptional co-repressor 1

SERF2

Gene (Entity type)

ENSG00000140264 - small EDRK-rich factor 2

AMPD2

Gene (Entity type)

ENSG00000116337 - adenosine monophosphate deaminase 2

MMP13

Gene (Entity type)

ENSG00000137745 - matrix metallopeptidase 13

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.