GSE142975 G9a knockdown RD 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE142975_G9a knockdown_RD_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE142975_G9a knockdown_RD_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE142975_G9a knockdown_RD_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE142975_G9a knockdown_RD_1_v_0_human_up.

Results found

Linked to

	Label	Description
	CPNE3 Gene (Entity type)	ENSG00000085719 - copine 3
	DYNLL2 Gene (Entity type)	ENSG00000264364 - dynein light chain LC8-type 2
	ULK1 Gene (Entity type)	ENSG00000177169 - unc-51 like autophagy activating kinase 1
	CHAF1B Gene (Entity type)	ENSG00000159259 - chromatin assembly factor 1 subunit B
	EIF4A2 Gene (Entity type)	ENSG00000156976 - eukaryotic translation initiation factor 4A2
	HIPK1 Gene (Entity type)	ENSG00000163349 - homeodomain interacting protein kinase 1
	PLK4 Gene (Entity type)	ENSG00000142731 - polo like kinase 4
	RBM6 Gene (Entity type)	ENSG00000004534 - RNA binding motif protein 6
	FANCA Gene (Entity type)	ENSG00000187741 - FA complementation group A
	AGPAT3 Gene (Entity type)	ENSG00000160216 - 1-acylglycerol-3-phosphate O-acyltransferase 3

CPNE3

Gene (Entity type)

ENSG00000085719 - copine 3

DYNLL2

Gene (Entity type)

ENSG00000264364 - dynein light chain LC8-type 2

ULK1

Gene (Entity type)

ENSG00000177169 - unc-51 like autophagy activating kinase 1

CHAF1B

Gene (Entity type)

ENSG00000159259 - chromatin assembly factor 1 subunit B

EIF4A2

Gene (Entity type)

ENSG00000156976 - eukaryotic translation initiation factor 4A2

HIPK1

Gene (Entity type)

ENSG00000163349 - homeodomain interacting protein kinase 1

PLK4

Gene (Entity type)

ENSG00000142731 - polo like kinase 4

RBM6

Gene (Entity type)

ENSG00000004534 - RNA binding motif protein 6

FANCA

Gene (Entity type)

ENSG00000187741 - FA complementation group A

AGPAT3

Gene (Entity type)

ENSG00000160216 - 1-acylglycerol-3-phosphate O-acyltransferase 3

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.