GSE163110 SKP2 knockdown 0 v 2 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE163110_SKP2 knockdown_0_v_2_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE163110_SKP2 knockdown_0_v_2_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE163110_SKP2 knockdown_0_v_2_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE163110_SKP2 knockdown_0_v_2_human_up.

Results found

Linked to

	Label	Description
	CHMP2A Gene (Entity type)	ENSG00000130724 - charged multivesicular body protein 2A
	GALE Gene (Entity type)	ENSG00000117308 - UDP-galactose-4-epimerase
	ACADM Gene (Entity type)	ENSG00000117054 - acyl-CoA dehydrogenase medium chain
	CAT Gene (Entity type)	ENSG00000121691 - catalase
	DAP Gene (Entity type)	ENSG00000112977 - death associated protein
	GRB2 Gene (Entity type)	ENSG00000177885 - growth factor receptor bound protein 2
	MEGF9 Gene (Entity type)	ENSG00000106780 - multiple EGF like domains 9
	NRG1 Gene (Entity type)	ENSG00000157168 - neuregulin 1
	THRA Gene (Entity type)	ENSG00000126351 - thyroid hormone receptor alpha
	ZNF32 Gene (Entity type)	ENSG00000169740 - zinc finger protein 32

CHMP2A

Gene (Entity type)

ENSG00000130724 - charged multivesicular body protein 2A

GALE

Gene (Entity type)

ENSG00000117308 - UDP-galactose-4-epimerase

ACADM

Gene (Entity type)

ENSG00000117054 - acyl-CoA dehydrogenase medium chain

CAT

Gene (Entity type)

ENSG00000121691 - catalase

DAP

Gene (Entity type)

ENSG00000112977 - death associated protein

GRB2

Gene (Entity type)

ENSG00000177885 - growth factor receptor bound protein 2

MEGF9

Gene (Entity type)

ENSG00000106780 - multiple EGF like domains 9

NRG1

Gene (Entity type)

ENSG00000157168 - neuregulin 1

THRA

Gene (Entity type)

ENSG00000126351 - thyroid hormone receptor alpha

ZNF32

Gene (Entity type)

ENSG00000169740 - zinc finger protein 32

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.