PAM Up (Gene Set)

Dcc Asset:

LINCS L1000 CRISPR KO Consensus Sigs.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with PAM Up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with PAM Up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with PAM Up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PAM Up.

Results found

Linked to

	Label	Description
	GIMAP5 Gene (Entity type)	ENSG00000196329 - GTPase, IMAP family member 5
	IL16 Gene (Entity type)	ENSG00000172349 - interleukin 16
	HEY2 Gene (Entity type)	ENSG00000135547 - hes related family bHLH transcription factor with YRPW motif 2
	IGSF6 Gene (Entity type)	ENSG00000140749 - immunoglobulin superfamily member 6
	CD3E Gene (Entity type)	ENSG00000198851 - CD3 epsilon subunit of T-cell receptor complex
	IFT52 Gene (Entity type)	ENSG00000101052 - intraflagellar transport 52
	NDUFC1 Gene (Entity type)	ENSG00000109390 - NADH:ubiquinone oxidoreductase subunit C1
	SNRPA Gene (Entity type)	ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A
	ELP5 Gene (Entity type)	ENSG00000170291 - elongator acetyltransferase complex subunit 5
	MRPS27 Gene (Entity type)	ENSG00000113048 - mitochondrial ribosomal protein S27

GIMAP5

Gene (Entity type)

ENSG00000196329 - GTPase, IMAP family member 5

IL16

Gene (Entity type)

ENSG00000172349 - interleukin 16

HEY2

Gene (Entity type)

ENSG00000135547 - hes related family bHLH transcription factor with YRPW motif 2

IGSF6

Gene (Entity type)

ENSG00000140749 - immunoglobulin superfamily member 6

CD3E

Gene (Entity type)

ENSG00000198851 - CD3 epsilon subunit of T-cell receptor complex

IFT52

Gene (Entity type)

ENSG00000101052 - intraflagellar transport 52

NDUFC1

Gene (Entity type)

ENSG00000109390 - NADH:ubiquinone oxidoreductase subunit C1

SNRPA

Gene (Entity type)

ENSG00000077312 - small nuclear ribonucleoprotein polypeptide A

ELP5

Gene (Entity type)

ENSG00000170291 - elongator acetyltransferase complex subunit 5

MRPS27

Gene (Entity type)

ENSG00000113048 - mitochondrial ribosomal protein S27

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Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.