GSE210718 SHMT2 knockdown 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE210718_SHMT2 knockdown_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE210718_SHMT2 knockdown_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE210718_SHMT2 knockdown_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE210718_SHMT2 knockdown_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	OIP5-AS1 Gene (Entity type)	OIP5 antisense RNA 1
	MRPL45 Gene (Entity type)	mitochondrial ribosomal protein L45
	SNHG15 Gene (Entity type)	small nucleolar RNA host gene 15
	UCA1 Gene (Entity type)	urothelial cancer associated 1
	LINC-PINT Gene (Entity type)	long intergenic non-protein coding RNA, p53 induced transcript
	ABCF2-H2BK1 Gene (Entity type)	ABCF2-H2BK1 readthrough
	LINC02984 Gene (Entity type)	long intergenic non-protein coding RNA 2984
	HIF1A-AS3 Gene (Entity type)	HIF1A antisense RNA 3
	FAM111A-DT Gene (Entity type)	FAM111A divergent transcript
	MIR155HG Gene (Entity type)	MIR155 host gene

OIP5-AS1

Gene (Entity type)

OIP5 antisense RNA 1

MRPL45

Gene (Entity type)

mitochondrial ribosomal protein L45

SNHG15

Gene (Entity type)

small nucleolar RNA host gene 15

UCA1

Gene (Entity type)

urothelial cancer associated 1

LINC-PINT

Gene (Entity type)

long intergenic non-protein coding RNA, p53 induced transcript

ABCF2-H2BK1

Gene (Entity type)

ABCF2-H2BK1 readthrough

LINC02984

Gene (Entity type)

long intergenic non-protein coding RNA 2984

HIF1A-AS3

Gene (Entity type)

HIF1A antisense RNA 3

FAM111A-DT

Gene (Entity type)

FAM111A divergent transcript

MIR155HG

Gene (Entity type)

MIR155 host gene

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.