GSE210718 SHMT2 knockdown 1 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE210718_SHMT2 knockdown_1_v_0_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE210718_SHMT2 knockdown_1_v_0_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE210718_SHMT2 knockdown_1_v_0_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE210718_SHMT2 knockdown_1_v_0_human_dn.

Results found

Linked to

	Label	Description
	PTPN12 Gene (Entity type)	ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12
	CDC123 Gene (Entity type)	ENSG00000151465 - cell division cycle 123
	DTX3L Gene (Entity type)	ENSG00000163840 - deltex E3 ubiquitin ligase 3L
	MAP2K3 Gene (Entity type)	ENSG00000034152 - mitogen-activated protein kinase kinase 3
	DYNLL2 Gene (Entity type)	ENSG00000264364 - dynein light chain LC8-type 2
	TGFBR1 Gene (Entity type)	ENSG00000106799 - transforming growth factor beta receptor 1
	STK17B Gene (Entity type)	ENSG00000081320 - serine/threonine kinase 17b
	MED28 Gene (Entity type)	ENSG00000118579 - mediator complex subunit 28
	SAR1A Gene (Entity type)	ENSG00000079332 - secretion associated Ras related GTPase 1A
	SLC7A6 Gene (Entity type)	ENSG00000103064 - solute carrier family 7 member 6

PTPN12

Gene (Entity type)

ENSG00000127947 - protein tyrosine phosphatase non-receptor type 12

CDC123

Gene (Entity type)

ENSG00000151465 - cell division cycle 123

DTX3L

Gene (Entity type)

ENSG00000163840 - deltex E3 ubiquitin ligase 3L

MAP2K3

Gene (Entity type)

ENSG00000034152 - mitogen-activated protein kinase kinase 3

DYNLL2

Gene (Entity type)

ENSG00000264364 - dynein light chain LC8-type 2

TGFBR1

Gene (Entity type)

ENSG00000106799 - transforming growth factor beta receptor 1

STK17B

Gene (Entity type)

ENSG00000081320 - serine/threonine kinase 17b

MED28

Gene (Entity type)

ENSG00000118579 - mediator complex subunit 28

SAR1A

Gene (Entity type)

ENSG00000079332 - secretion associated Ras related GTPase 1A

SLC7A6

Gene (Entity type)

ENSG00000103064 - solute carrier family 7 member 6

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.